Difference between revisions of "Squigglekit"

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{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|squigglekit}}
 
|{{#vardefine:app|squigglekit}}

Latest revision as of 15:55, 22 August 2022

Description

squigglekit website  

A toolkit for manipulating nanopore signal data

Environment Modules

Run module spider squigglekit to find out what environment modules are available for this application.

System Variables

  • HPC_SQUIGGLEKIT_DIR - installation directory
  • HPC_SQUIGGLEKIT_BIN - executable directory

Additional Information

$ module load squigglekit/1.0.0

$ fast5_fetcher.py

$ SquigglePlot.py

$ SquigglePull.py