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• Category:Software
  Or you can browse through the sub-categories or software package names in the table below. To add a documentation page for a new piece of software installed into /apps please go to [[Add New App Page]].
  2,137 members (62 subcategories, 0 files) - 19:53, 20 February 2024
• Installed Software
  26 bytes (2 words) - 17:41, 28 September 2017
• Software Development
  #REDIRECT [[Software Development Policies]]
  43 bytes (4 words) - 20:46, 6 June 2022
• Software Development Policies
  ==External Software Components== ...d to get a security review or risk assessment for such software. Only when software is exposed to the outside world, e.g. as part of PubApps, will a security r
  533 bytes (84 words) - 15:43, 19 August 2022

Page text matches

• Amuse
  [[Category:Software]][[Category:Astronomy]] AMUSE is an Astrophysical Multipurpose Software Environment. Within AMUSE different existing numerical codes are incorporat
  2 KB (287 words) - 20:34, 15 August 2022
• Talon
  [[Category:Software]]
  3 KB (321 words) - 15:13, 23 September 2022
• BoltzTraP
  [[Category:Software]][[Category:Physics]]
  2 KB (279 words) - 16:19, 10 June 2022
• CellRanger
  [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:RNA-Seq]] |{{#vardefine:url|https://support.10xgenomics.com/single-cell/software/pipelines/latest/what-is-cell-ranger}}
  2 KB (294 words) - 18:24, 12 August 2022
• DeFusion
  [[Category:Software]][[Category:Phylogenetics]]
  2 KB (246 words) - 22:22, 26 August 2020
• Intervene
  [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]
  3 KB (295 words) - 21:21, 6 December 2019
• Genewalk
  [[Category:Software]][[Category:Phylogenetics]]
  2 KB (274 words) - 18:30, 16 May 2023
• Clann
  [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] It is also important for the user to know that the software is designed to
  3 KB (438 words) - 18:30, 12 August 2022
• Moses
  [[Category:Software]]
  3 KB (381 words) - 15:15, 17 October 2022
• CASAVA
  [[Category:Software]][[Category:Biology]][[Category:NGS]] |{{#vardefine:url|http://www.illumina.com/software/genome_analyzer_software.ilmn}}
  3 KB (340 words) - 18:23, 12 August 2022
• MIRA
  [[Category:Software]][[Category:Biology]][[Category:Genomics]][[Category:Assembly]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->
  2 KB (313 words) - 20:42, 18 August 2022
• EMBOSS
  [[Category:Software]][[Category:Biology]] ...to a seamless whole. EMBOSS breaks the historical trend towards commercial software packages.
  3 KB (372 words) - 15:01, 15 August 2022
• ArrayFire
  [[Category:Software]][[Category:Math]]
  3 KB (315 words) - 14:52, 12 August 2022
• GSEA
  [[Category:Software]][[Category:Biology]][[Category:Genomics]] ...://www.pnas.org/content/102/43/15545.abstract To cite your use of the GSEA software, a joint project of UC San Diego and Broad Institute, please reference Subr
  2 KB (298 words) - 17:27, 15 August 2022
• Category:Variant Calling
  [[Category:Software]][[Category:Biology]]
  13 members (0 subcategories, 0 files) - 19:51, 22 August 2022
• Ldsc
  [[Category:Software]][[Category:genomics‏‎]][[Category:Biology]]
  2 KB (283 words) - 13:30, 15 August 2022
• SpinalCordToolbox
  [[Category:Software]][[Category:Phylogenetics]]
  2 KB (253 words) - 18:43, 1 June 2022
• SMR
  [[Category:Software]] |{{#vardefine:url|https://cnsgenomics.com/software/smr/#Overview}}
  3 KB (362 words) - 18:27, 19 August 2021
• PhyloBayes
  [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->
  3 KB (375 words) - 20:20, 12 August 2022
• ANNOVAR
  [[Category:Software]][[Category:Biology]][[Category:Genomics]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->
  4 KB (545 words) - 14:16, 12 August 2022

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