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  • Flopp
    ...fers an order of magnitude speedup and better accuracies compared to other polyploid haplotype phasing algorithms.
    2 KB (286 words) - 18:35, 1 December 2023
  • GenomeScope2
    ...cal model of how k-mer frequencies will be distributed in heterozygous and polyploid genomes. ...chatz, M.C. GenomeScope 2.0 and Smudgeplot for reference-free profiling of polyploid genomes. Nature Communications 11, 1432 (2020).]
    3 KB (308 words) - 22:07, 15 March 2022
  • HAPLOSWEEP
    Haplotype-based genotyping designed for polyploid species
    2 KB (260 words) - 21:20, 6 December 2019
  • Smudgeplot
    ...chatz, M.C. GenomeScope 2.0 and Smudgeplot for reference-free profiling of polyploid genomes. Nature Communications 11, 1432 (2020).]
    3 KB (315 words) - 15:19, 4 May 2021
  • Allhic
    ALLHiC: phasing and scaffolding polyploid genomes based on Hi-C data
    3 KB (299 words) - 12:35, 12 August 2022
  • SHEsisPlus
    ...ruction at multiallelic polymorphism loci, compatible for both diploid and polyploid species.
    3 KB (344 words) - 15:04, 19 August 2022
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