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  • 9 members (0 subcategories, 0 files) - 18:10, 3 June 2022
  • 7 members (0 subcategories, 0 files) - 18:10, 3 June 2022
  • |{{#vardefine:app|c-wap}} |{{#vardefine:url|https://github.com/CFSAN-Biostatistics/C-WAP}}
    2 KB (283 words) - 18:59, 5 July 2022
  • |{{#vardefine:app|netcdf-c}}
    2 KB (279 words) - 14:53, 3 June 2022
  • ...[[Category:Biology]][[Category:programming]][[Category:library]][[Category:C++]][[Category:NCBI]] NCBI C++ Toolkit provides free, portable, public domain libraries with no restrict
    3 KB (306 words) - 19:55, 12 August 2022
  • File:2012-04-19-Parallel Processing-C Taylor.ppt
    (1.42 MB) - 16:10, 19 April 2012

Page text matches

  • ...n-us/intel-parallel-studio-xe Intel Compiler Suite] provides Fortran and C/C++ compilers and is preferred compiler option on hipergator. The [https://gcc.gnu.org GNU Compiler Suite] provides Fortran and C/C++ compilers.
    1 KB (159 words) - 22:30, 26 July 2021
  • mpicc ( C source) mpiCC (C++ source)
    3 KB (300 words) - 17:39, 6 June 2022
  • [[Category:Software]][[Category:library]][[Category:development]][[Category:C++]][[Category:python]] ...the 'glue code' required for the above target languages to call into the C/C++ code. SWIG can also export its parse tree in the form of XML and Lisp s-e
    3 KB (416 words) - 21:24, 6 December 2019
  • [[Category:Software]][[Category:Library]][[Category:Programming]][[Category:C++]] "Boost provides free peer-reviewed portable C++ source libraries.
    3 KB (350 words) - 17:30, 10 June 2022
  • ...ng dilution Hi-C, in situ Hi-C, DNase Hi-C, Micro-C, capture-C, capture Hi-C or HiChip data. ..., Heard E., Barillot E. HiC-Pro: An optimized and flexible pipeline for Hi-C processing. Genome Biology 2015, 16:259 doi:10.1186/s13059-015-0831-x
    3 KB (426 words) - 16:41, 28 June 2021
  • sander -O -i amber.in -o amber.log -p amber.prmtop -c amber.inpcrd mpiexec sander.MPI -O -i amber.in -o amber.log -p amber.prmtop -c amber.inpcrd
    1 KB (167 words) - 17:38, 26 June 2017
  • |{{#vardefine:url|http://xerces.apache.org/#xerces-c}} ...or parsing, generating, manipulating, and validating XML documents. Xerces-C++ is faithful to the XML 1.0 and 1.1 recommendations and many associated st
    3 KB (306 words) - 21:29, 6 December 2019
  • The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, as well as libraries for these languages (libstdc+
    2 KB (251 words) - 18:42, 21 July 2022
  • ...n rates from population genetic data. The package is available either as C/C++ source code.
    2 KB (296 words) - 17:09, 10 June 2022
  • ...ython interface provides a high-level yet efficient API to use most of the C++ interface with ease.
    3 KB (323 words) - 17:17, 10 June 2022
  • ...stq raw data files and command line tools for feature annotation on the Hi-C maps.
    2 KB (275 words) - 21:22, 6 December 2019
  • FreeSASA is a C library and C++ command line tool for calculating Solvent Accessible Surface Area (SASA) Simon Mitternacht (2016) FreeSASA: An open source C library for solvent accessible surface area calculations. F1000Research 5:1
    2 KB (273 words) - 15:47, 22 July 2022
  • [[Category:Software]][[Category:Library]][[Category:C]][[Category:Astrophysics]] ...ry for astrophysical simulations and models. Grackle has interfaces for C, C++, Fortran, and Python codes and provides:
    2 KB (294 words) - 13:16, 6 June 2022
  • ...possible tree topology. To run ASAQ it is necessary to have installed the C++ linear algebra library Armadillo ...//arma.sourceforge.net/armadillo_joss_2016.pdf Armadillo: a template-based C++ library for linear algebra]. Journal of Open Source Software, Vol. 1, pp.
    3 KB (374 words) - 15:10, 1 June 2022
  • The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, Ada, and Go, as well as libraries for these languages (libs
    2 KB (298 words) - 13:59, 6 June 2022
  • annotated C++ sources, but it also supports other popular programming languages such as C, Objective-C, C#, PHP, Java, Python, IDL (Corba and
    3 KB (404 words) - 19:07, 10 June 2022
  • Intel® Cluster Studio features the acclaimed Intel Fortran and C++ Compilers. These performance-oriented compilers can deliver a remarkable Intel Compilers support OpenMP. Developers using C or C++ can create and manage portable, shared-memory parallelism in their applic
    3 KB (332 words) - 19:30, 10 June 2022
  • [[Category:Software]][[Category:Library]][[Category:C]][[Category:Math]] Fastest Fourier Transform in the West, is a C library for computing the Discrete Fourier Transform (DFT) in one or more d
    2 KB (223 words) - 19:27, 3 June 2022
  • ...GPU acceleration of HPC modeling and simulation applications with standard C++ and Fortran, OpenACC® directives, and CUDA®. GPU-accelerated math libra
    3 KB (334 words) - 19:06, 6 June 2022
  • ...e, G. D., Hunagel, D. E., Lei, J., Achawanantakun, R., Jiao, D., Lawrence, C. J., Ware, D., Shiu, S-H., Childs, K. L., Sun, Y., Jiang, N, Yandell, M. 20
    3 KB (329 words) - 21:22, 6 December 2019
  • [[Category:Software]][[Category:Programming]][[Category:Library]][[Category:C++]] C++ library and its applications to generate and process accurate consensus s
    2 KB (268 words) - 15:59, 6 June 2022
  • ...ry:Software]][[Category:Library]][[Category:Math]][[Category:C]][[Category:C++]]
    2 KB (265 words) - 13:41, 6 June 2022
  • ...ing machine learning algorithms and tools for creating complex software in C++ to solve real world problems. See http://dlib.net for the main project do
    2 KB (269 words) - 13:11, 4 May 2020
  • A tool to scaffold long read assemblies with Hi-C Ghurye, J., Pop, M., Koren, S., Bickhart, D., & Chin, C. S. (2017). Scaffolding of long read assemblies using long range contact in
    2 KB (267 words) - 20:06, 10 June 2022
  • Armadillo is a high quality C++ linear algebra library, aiming towards a good balance between speed and e ...://arma.sourceforge.net/armadillo_nicta_2010.pdf Armadillo: An Open Source C++ Linear Algebra Library for Fast Prototyping and Computationally Intensive
    2 KB (269 words) - 14:33, 12 August 2022
  • [[Category:Software]][[Category: Library]][[Category: Math]][[Category:C]] ...ead-safe, but, unlike MPFUN2020, is available with both a Fortran-90 and a C++ high-level interface.
    2 KB (271 words) - 19:46, 21 July 2022
  • ...marsh, P. N. Brown, K. E. Grant, S. L. Lee, R. Serban, D. E. Shumaker, and C. S. Woodward, "SUNDIALS: Suite of Nonlinear and Differential/Algebraic Equa * R. Serban and A. C. Hindmarsh, "CVODES: the Sensitivity-Enabled ODE Solver in SUNDIALS," Proce
    3 KB (367 words) - 13:45, 13 June 2022
  • ...re (C), MagickWand (C), ChMagick (Ch), ImageMagickObject (COM+), Magick++ (C++), JMagick (Java), L-Magick (Lisp), Lua, NMagick (Neko/haXe), Magick.NET (
    3 KB (378 words) - 19:13, 10 June 2022
  • [[Category:Software]][[Category:C]][[Category:Fortran]][[Category:Library]] The ECMWF GRIB API is an application program interface accessible from C,
    2 KB (280 words) - 13:30, 6 June 2022
  • ...e that the Fortran module man not have all supporting binaries that netcdf-c module has.
    3 KB (383 words) - 14:53, 3 June 2022
  • |{{#vardefine:app|c-wap}} |{{#vardefine:url|https://github.com/CFSAN-Biostatistics/C-WAP}}
    2 KB (283 words) - 18:59, 5 July 2022
  • BERTopic is a topic modeling technique that leverages transformers and c-TF-IDF to create dense clusters allowing for easily interpretable topics wh [https://zenodo.org/record/4719700 BERTopic: Leveraging BERT and c-TF-IDF to create easily interpretable topics.]
    2 KB (283 words) - 14:00, 27 May 2022
  • [[Category:Software]][[Category:Library]][[Category:C]] CFITSIO is a library of C and Fortran subroutines for reading and writing data files in FITS (Flexibl
    2 KB (291 words) - 16:43, 10 June 2022
  • ...[[Category:Biology]][[Category:programming]][[Category:library]][[Category:C++]][[Category:NCBI]] NCBI C++ Toolkit provides free, portable, public domain libraries with no restrict
    3 KB (306 words) - 19:55, 12 August 2022
  • PLINK/SEQ is an open-source C/C++ library for working with human genetic variation data. The specific focus
    2 KB (296 words) - 20:25, 12 August 2022
  • J. A. Anderson, C. D. Lorenz, and A. Travesset. General purpose molecular dynamics simulation ...D. Nguyen, J. A. Anderson, P. Liu, F. Spiga, J. A. Millan, D. C. Morse, S. C. Glotzer. Strong scaling of general-purpose molecular dynamics simulations
    5 KB (607 words) - 15:40, 6 June 2022
  • The GNU Scientific Library (GSL) is a numerical library for C and C++ programmers. It is free software under the GNU General
    2 KB (299 words) - 20:12, 10 June 2022
  • ...des several hundreds of computer vision algorithms. Written in optimized C/C++, the library can take advantage of multi-core processing. Enabled with Op
    2 KB (283 words) - 21:31, 6 December 2019
  • ...M., Mirza, G., Butler, H., Clouston, P., Basset, A.S., Seller, A., Holmes, C., and Ragoussis, J. QuantiSNP: an Objective Bayes Hidden-Markov Model to de
    2 KB (297 words) - 20:29, 12 August 2022
  • ...te (JTS). As such, it aims to contain the complete functionality of JTS in C++. This includes all the ​OpenGIS Simple Features for SQL spatial predica
    3 KB (306 words) - 19:46, 3 June 2022
  • ...orage and worklist servers. DCMTK is is written in a mixture of ANSI C and C++. It comes in complete source code and is made available as "open source"
    3 KB (304 words) - 20:31, 10 June 2022
  • pbmm2 is a SMRT C++ wrapper for minimap2's C API. Its purpose is to support native PacBio in- and output, provide sets o
    3 KB (303 words) - 20:08, 31 May 2022
  • ...olkit for performance analysis of parallel programs written in Fortran, C, C++, UPC, Java, Python. ...methods, basic blocks, and statements as well as event-based sampling. All C++ language features are supported including templates and namespaces. The A
    3 KB (443 words) - 17:37, 6 June 2022
  • Hoffmann S, Otto C, Kurtz S, Sharma CM, Khaitovich P, Vogel J, Stadler PF, Hackermueller J: "F Hoffmann S, Otto C, Doose G, Tanzer A, Langenberger D, Christ S, Kunz M, Holdt L, Teupser D, H
    3 KB (404 words) - 20:38, 12 August 2022
  • ...ary fully written from scratch in pure ANSI C. It is designed to offer for C programmers common data structures with powerful algorithms, and hidden imp
    3 KB (305 words) - 15:37, 6 June 2022
  • ...olkit for performance analysis of parallel programs written in Fortran, C, C++, Java, Python. ...h instrumentation of functions, methods, basic blocks, and statements. All C++ language features are supported including templates and namespaces. The A
    4 KB (575 words) - 21:31, 6 December 2019
  • ...liquid, solid, or gaseous state. It is a open source software, written in C++ and developed at Sandia laboratory. It can be used to model atomic, polym ...CMAKE_INSTALL_PREFIX=<target_lammps_dir> -C ../cmake/presets/all_on.cmake -C ../cmake/presets/nolib.cmake ../cmake
    3 KB (467 words) - 23:34, 20 August 2021
  • ALLHiC: phasing and scaffolding polyploid genomes based on Hi-C data ...embly of allele-aware, chromosomal scale autopolyploid genomes based on Hi-C data. Nature Plants, doi:10.1038/s41477-019-0487-8 (2019).
    3 KB (299 words) - 12:35, 12 August 2022
  • * C * C++
    3 KB (320 words) - 17:31, 10 June 2022
  • ...n: Dudchenko et al., De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds. Science, 2017. ...A.P., et al. (2017). De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds. Science eaal3327. Published online ahea
    3 KB (328 words) - 17:51, 10 June 2022

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