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- Or you can browse through the sub-categories or software package names in the table below. To add a documentation page for a new piece of software installed into /apps please go to [[Add New App Page]].2,127 members (62 subcategories, 0 files) - 19:53, 20 February 2024
- 26 bytes (2 words) - 17:41, 28 September 2017
- #REDIRECT [[Software Development Policies]]43 bytes (4 words) - 20:46, 6 June 2022
- ==External Software Components== ...d to get a security review or risk assessment for such software. Only when software is exposed to the outside world, e.g. as part of PubApps, will a security r533 bytes (84 words) - 15:43, 19 August 2022
Page text matches
- [[Category:Software]][[Category:Biology]][[Category:NGS]]2 KB (273 words) - 18:12, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (318 words) - 21:23, 6 December 2019
- [[Category:Software]][[Category:Biology]] If you like our software and have used it in your research project, please cite the following paper3 KB (403 words) - 23:35, 6 February 2023
- [[Category:Biology]][[Category:Software]][[Category:Research]] Phylogenetics software and documentation764 members (0 subcategories, 0 files) - 21:43, 24 October 2022
- [[Category:Software]][[Category:web]][[Category:library]]2 KB (280 words) - 18:02, 15 August 2022
- [[Category:Software]][[Category:Biology]]2 KB (256 words) - 20:07, 6 April 2023
- [[Category:Biology]][[Category:Software]]7 members (0 subcategories, 0 files) - 20:57, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (305 words) - 13:11, 21 October 2020
- [[Category:Software]]2 KB (292 words) - 18:14, 8 March 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Sequencing]]4 KB (489 words) - 12:01, 19 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (400 words) - 17:17, 31 May 2022
- [[Category:Software]][[Category:Programming]]3 KB (350 words) - 18:56, 21 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (286 words) - 14:52, 12 October 2021
- [[Category:Software]][[Category:Astronomy]]2 KB (250 words) - 13:13, 6 June 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (240 words) - 18:34, 31 May 2022
- [[Category:Software]][[Category:Biology]][[Category:Sequencing]]3 KB (299 words) - 17:06, 10 June 2022
- * Get priority help with software, hardware, coding, or architecture2 KB (378 words) - 18:33, 13 June 2023
- [[Category:Software]][[Category:Biology]][[Category:NGS]] This module enables the use of the eXpress software3 KB (383 words) - 18:53, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (382 words) - 14:27, 23 April 2020
- [[Category:Software]]3 KB (302 words) - 18:59, 1 February 2021
- [[Category:Software]][[Category:Biology]][[Category:NGS]]3 KB (382 words) - 15:25, 15 August 2022
- [[Category:Software]][[Category:biology]][[Category:NGS]][[Category:Workflow Automation]] |{{#vardefine:url|https://www.pacb.com/products-and-services/analytical-software/devnet/}}2 KB (250 words) - 20:10, 24 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:RNA-Seq]][[Category:Genomic |{{#vardefine:url|https://support.10xgenomics.com/single-cell-dna/software/pipelines/latest/what-is-cell-ranger-dna}}2 KB (263 words) - 13:25, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Variant Calling]] 4P (Parallel Processing of Polymorphism Panels) is a software for computing2 KB (285 words) - 20:36, 11 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Sequencing]]2 KB (273 words) - 16:14, 10 June 2022
- [[Category:Software]][[Category:Biology]]3 KB (364 words) - 20:55, 12 August 2022
- [[Category:Software]]5 KB (527 words) - 14:45, 14 December 2022
- [[Category:Software]][[Category:Genomics]][[Category:Biology]]3 KB (298 words) - 15:54, 6 July 2022
- [[Category:Software]][[Category:Data Science]][[Category:Biology]]2 KB (248 words) - 17:56, 19 August 2022
- [[Category:Software]]2 KB (284 words) - 20:40, 12 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]][[Category:NGS]] Stacks is a software pipeline for building loci out of a set of short-read sequenced samples. St4 KB (658 words) - 21:20, 2 January 2023
- [[Category:Software]][[Category:Programming]][[Category:Programming]][[Category:Library]]2 KB (244 words) - 12:02, 26 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (319 words) - 21:24, 6 December 2019
- [[Category:Software]][[Category:Data Science]][[Category:Math]] |{{#vardefine:url|http://www.phidot.org/software/mark/index.html}}2 KB (329 words) - 18:22, 18 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] PHAST is a freely available software package for comparative and evolutionary genomics. It consists of about hal3 KB (320 words) - 17:17, 10 June 2022
- [[Category:Software]][[Category:Chemistry]] Zeo++ is a open source software for performing high-throughput geometry-based analysis of porous materials3 KB (424 words) - 19:47, 27 May 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (335 words) - 20:48, 23 May 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]2 KB (286 words) - 19:46, 12 August 2022
- [[Category:Software]][[Category:Modeling]] ...eatures for reconstruction of ordered and unordered image collections. The software is licensed under the new BSD license. If you use this project for your res2 KB (290 words) - 16:53, 6 June 2022
- [[Category:Software]][[Category:Machine Learning]] PATRIC is an integration of different types of data and software tools that support research on bacterial pathogens. The typical biologist s3 KB (390 words) - 16:04, 6 June 2022
- [[Category:Software]][[Category:Biology]] |{{#vardefine:url|http://www.fil.ion.ucl.ac.uk/spm/software/spm8/}}3 KB (327 words) - 17:00, 13 February 2024
- [[Category:Software]][[Category:Molecular Dynamics]] |{{#vardefine:exe|1}} <!--Present manual instructions for running the software -->2 KB (288 words) - 16:38, 10 June 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->3 KB (372 words) - 18:28, 18 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (325 words) - 21:24, 6 December 2019
- [[Category:Software]][[Category:Programming]]2 KB (229 words) - 12:24, 26 August 2022
- [[Category:Software]][[Category:Library]][[Category:Math]][[Category:Compiler]] |{{#vardefine:url|http://www.scalasca.org/software/cube-4.x}}3 KB (329 words) - 14:14, 15 August 2022
- [[Category:Software]]2 KB (287 words) - 20:25, 21 February 2024
- [[Category:Software]][[Category:Biology]][[Category:Alignment]] MaSuRCA is whole genome assembly software. It combines the efficiency of the de Bruijn graph and Overlap-Layout-Conse3 KB (340 words) - 18:24, 18 August 2022
- [[Category:Software]][[Category:Data Mining]]2 KB (288 words) - 16:47, 17 October 2023
- [[Category:Software]]2 KB (265 words) - 19:28, 12 August 2022
- [[Category:Software]][[Category:Physics]]3 KB (339 words) - 18:12, 21 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Sequencing]][[Category:Genomics]]2 KB (289 words) - 19:26, 2 June 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]2 KB (289 words) - 19:33, 13 June 2023
- [[Category:Software]]22 members (0 subcategories, 0 files) - 15:37, 3 June 2022
- [[Category:Software]][[Category:Biology]][[Category:Sequencing]][[Category:NGS]]3 KB (311 words) - 18:57, 12 August 2022
- [[Category:Software]][[Category:Performance Analysis]]3 KB (321 words) - 17:22, 22 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Phylogenetics]] ClonalFrameML is a software package that performs efficient inference of3 KB (348 words) - 13:47, 15 August 2022
- [[Category:Software]][[Category:Library]][[Category:Programming]][[Category:Compiler]] LAPACK is a standard software library for numerical linear algebra. It provides routines for solving syst2 KB (286 words) - 17:43, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (271 words) - 15:25, 15 August 2022
- [[Category:Software]][[Category:Math]] This is a GUI software. Follow the instructions at https://wiki.rc.ufl.edu/doc/GUI_Programs2 KB (298 words) - 21:21, 6 December 2019
- [[Category:Software]][[Category:Biology]][[Category:genomics]] ...for Quantitative Insights Into Microbial Ecology. QIIME is an open source software package for comparison and analysis of microbial communities, primarily bas3 KB (435 words) - 15:15, 19 August 2022
- [[Category:Software]][[Category:Modeling]]3 KB (300 words) - 21:17, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]2 KB (241 words) - 19:43, 1 June 2022
- [[Category:Software]][[Category:Biology]]3 KB (356 words) - 17:44, 22 August 2022
- [[Category:Software]][[Category:library]][[Category:Scheduler Apps]][[Category:Programming]] ..., portal developers and ISVs can use the same high-level API to link their software with different cluster/resource management systems.3 KB (316 words) - 14:30, 11 July 2023
- [[Category:Software]][[Category:Biology]][[Category:Variant Calling]]2 KB (263 words) - 12:56, 15 August 2022
- [[Category:Software]][[Category:Math]]2 KB (279 words) - 12:27, 19 August 2022
- [[Category:Software]][[Category:Biology]][[Category:imaging]][[Category:Machine Learning]] ...data with deep learning methods. ClinicaDL install includes the 'clinica' software platform for clinical research studies involving patients with neurological3 KB (323 words) - 13:41, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Biology]][[Category:Genomics]] ...Efficient and Parallelizable Association Container Toolbox) is a versatile software pipeline to perform various statistical tests for identifying genome-wide a2 KB (269 words) - 18:52, 12 August 2022
- [[Category:Software]][[Category:Utility]]3 KB (326 words) - 14:05, 17 September 2020
- [[Category:Software]][[Category:Phylogenetics]][[Category:Sequencing]][[Category:Biology]]2 KB (289 words) - 16:49, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]2 KB (254 words) - 18:52, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (259 words) - 18:20, 27 May 2022
- [[Category:Software]][[Category:Phylogenetics]] ...hat is specialized for high effiency when counting k-mers for large k. The software is decribed here.3 KB (320 words) - 14:34, 3 January 2020
- [[Category:Software]]1 KB (144 words) - 21:20, 8 November 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]2 KB (272 words) - 21:02, 6 December 2019
- [[Category:Software]][[Category:Biology]][[Category:Genomics]] Meta-Tissue is a free software for identifying eQTLs from multiple tissues. It uses meta-analysis to combi3 KB (327 words) - 14:57, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:RNA-Seq]]3 KB (305 words) - 19:29, 3 June 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (287 words) - 19:56, 6 November 2020
- [[Category:Software]][[Category:Geospatial]]2 KB (287 words) - 20:27, 24 August 2022
- [[Category:Software]][[Category:Neuroscience]][[Category:Biology]][[Category:Imaging]] Slicer, or 3D Slicer, is a free, open source software package for visualization and image analysis. 3D Slicer is natively designe2 KB (290 words) - 20:41, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (292 words) - 21:20, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]] This software package infers population size history from a diploid sequence2 KB (263 words) - 14:01, 28 February 2020
- [[Category:Software]][[Category:math]][[Category:visualization]]2 KB (248 words) - 14:10, 11 October 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Math]] |{{#vardefine:exe|1}} <!--Present manual instructions for running the software -->3 KB (458 words) - 21:46, 21 August 2022
- [[Category:Software]][[Category:biology]]2 KB (236 words) - 21:21, 6 December 2019
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]3 KB (306 words) - 17:00, 10 June 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (268 words) - 21:21, 6 December 2019
- [[Category:Software]] These software tools are highly integrated and based on reusable software3 KB (357 words) - 17:03, 6 June 2022
- [[Category:Software]][[Category:Utility]] |{{#vardefine:url|http://marecilab.mbi.ufl.edu/software/TrackTools/TrackTools.zip}}2 KB (251 words) - 16:40, 22 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (281 words) - 13:58, 7 May 2020
- [[Category:Software]][[Category:Phylogenetics]]2 KB (260 words) - 19:25, 18 February 2021
- [[Category:Software]][[Category:Programming]]3 KB (448 words) - 19:10, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]] An open-source software package that builds on popular orthology-calling approaches making highly c3 KB (306 words) - 21:20, 6 December 2019
- [[Category:Software]]2 KB (246 words) - 15:19, 18 July 2023
- [[Category:Software]][[Category:Data Mining]]3 KB (302 words) - 16:49, 10 June 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]][[Category:RNA-Seq]]2 KB (247 words) - 15:15, 10 June 2022
- [[Category:Software]][[Category:Biology]]3 KB (317 words) - 21:02, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]2 KB (248 words) - 16:14, 27 May 2022
- [[Category:Software]] Trimesh [Computer software]. (2019). Retrieved from https://github.com/mikedh/trimesh2 KB (288 words) - 15:36, 9 March 2023
- [[Category:Software]] Compacta is a software designed to reduce the number of contigs given by3 KB (294 words) - 13:52, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (291 words) - 14:13, 22 April 2021
- [[Category:Software]][[Category:Statistics]][[Category:Graphics]] |{{#vardefine:exe|1}} <!--Present manual instructions for running the software -->2 KB (256 words) - 17:17, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Alignment]]3 KB (305 words) - 19:31, 24 August 2022
- [[Category:Software]][[Category:Programming]][[Category:Search]]2 KB (262 words) - 12:11, 26 August 2022
- [[Category:Software]] DRETools is a command-line software package for studying differential RNA editing.2 KB (226 words) - 16:05, 22 May 2023
- [[Category:Software]][[Category:biology]][[Category:genomics]]3 KB (321 words) - 21:29, 6 December 2019
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]3 KB (348 words) - 22:07, 20 October 2023
- [[Category:Software]][[Category:Biology]][[Category:Sequencing]]2 KB (268 words) - 19:02, 21 July 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (342 words) - 22:21, 26 August 2020
- [[Category:Software]] This software requires GUI. See more: [https://help.rc.ufl.edu/doc/GUI_Programs GUI Progr3 KB (369 words) - 15:57, 13 September 2022
- [[Category:Software]][[Category:Biology]]2 KB (252 words) - 13:48, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Chemistry]] DOT is a software package for docking macromolecules, including proteins, DNA, and RNA. DOT p3 KB (340 words) - 14:46, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]2 KB (258 words) - 21:21, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]2 KB (241 words) - 18:28, 1 June 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]2 KB (283 words) - 15:26, 15 August 2022
- [[Category:Software]]11 members (1 subcategory, 0 files) - 19:51, 22 August 2022
- [[Category:Software]][[Category:Library]][[Category:Compression]]3 KB (317 words) - 20:38, 10 June 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (322 words) - 22:16, 27 August 2020
- Or you can browse through the sub-categories or software package names in the table below. To add a documentation page for a new piece of software installed into /apps please go to [[Add New App Page]].2,127 members (62 subcategories, 0 files) - 19:53, 20 February 2024
- [[Category:Software]]2 KB (271 words) - 15:56, 27 June 2023
- [[Category:Software]][[Category:Phylogenetics]]3 KB (338 words) - 14:53, 9 December 2019
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]2 KB (257 words) - 21:29, 6 December 2019
- [[Category:Software]]2 KB (251 words) - 20:38, 12 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]2 KB (238 words) - 14:56, 10 June 2022
- [[Category:Software]][[Category:Library]][[Category:Math]][[Category:GPU]] |{{#vardefine:url|http://www.deeplearning.net/software/theano/}}3 KB (345 words) - 15:58, 6 June 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:RNA-Seq]]2 KB (264 words) - 17:26, 22 August 2022
- [[Category:Software]]3 KB (429 words) - 20:16, 3 June 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (262 words) - 19:01, 13 December 2021
- [[Category:Software]][[Category:Spectroscopy]][[Category:Biology]]3 KB (417 words) - 13:28, 7 July 2023
- ...ten in C++. The library can be used as the basis for BGEN support in other software, or as a reference for developers writing their own implementations of the2 KB (291 words) - 12:52, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]2 KB (296 words) - 21:24, 6 December 2019
- [[Category:Software]][[Category:Machine Learning]][[Category:Molecular Dynamics]]2 KB (253 words) - 17:59, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->3 KB (375 words) - 20:55, 12 August 2022
- [[Category:Software]][[Category:biology]][[Category:phylogenetics]] |{{#vardefine:url|http://phylo.bio.ku.edu/software/sate/sate.html}}7 KB (910 words) - 20:43, 21 December 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] |{{#vardefine:exe|1}} <!--Present manual instructions for running the software -->4 KB (553 words) - 14:27, 27 June 2023
- [[Category:Software]][[Category:Biology]][[Category:Sequencing]] |{{#vardefine:url|http://eddylab.org/software/recon/}}2 KB (260 words) - 21:38, 21 August 2022
- [[Category:Software]][[Category:Workflow Automation]]3 KB (410 words) - 21:30, 6 February 2023
- [[Category:Software]][[Category:Image Processing]] |{{#vardefine:url|http://cryoem.ucsd.edu/wikis/software/start.php?id=auto3dem:home}}3 KB (433 words) - 15:24, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (252 words) - 17:02, 29 September 2020
- [[Category:Software]][[Category:genomics]][[Category:Biology]]3 KB (341 words) - 13:31, 15 August 2022
- [[Category:Software]]2 KB (246 words) - 20:40, 21 June 2017
- [[Category:Software]][[Category:Phylogenetics]] TEMP is a software package for detecting transposable elements (TEs) insertions and absences f2 KB (270 words) - 21:29, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]2 KB (245 words) - 17:40, 24 January 2020
- [[Category:Software]][[Category:Statistics]]2 KB (282 words) - 15:56, 22 February 2023
- [[Category:Software]][[Category:biology]][[Category:NGS]]2 KB (236 words) - 18:45, 12 August 2022
- [[Category:Software]][[Category:Language]][[Category:Math]] |{{#vardefine:exe|1}} <!--Present manual instructions for running the software -->9 KB (1,361 words) - 16:06, 28 November 2023
- [[Category:Software]][[Category:Phylogenetics]] HyDe is a software package that detects hybridization in phylogenomic data sets using phylogen3 KB (301 words) - 20:41, 30 September 2020
- [[Category:Software]][[Category:genomics]][[Category:Biology]]2 KB (260 words) - 13:31, 15 August 2022
- [[Category:Software]][[Category:Library]][[Category:Data Science]] |{{#vardefine:url|http://www.gnu.org/software/gsl}}3 KB (317 words) - 15:19, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (342 words) - 21:15, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]] ...on the well-known Insight Segmentation and Registration Toolkit (ITK). The software consists of a collection of algorithms that are commonly used to solve (med3 KB (365 words) - 15:30, 3 June 2022
- [[Category:Software]][[Category:Phylogenetics]] Software and source code of FastqPuri. It creates quality reports of fastq files and2 KB (272 words) - 15:29, 19 January 2021
- [[Category:Software]][[Category:Chemistry]] |{{#vardefine:url|http://spin.niddk.nih.gov/bax/software/SPARTA+/}}2 KB (262 words) - 13:55, 6 June 2022
- [[Category:Software]][[Category:Language]][[Category:Programming]][[Category:Performance Analys uniform way through a class library supporting common PDB operations. Software3 KB (370 words) - 14:38, 18 October 2022
- [[Category:Software]][[Category:Phylogenetics]] panX is a software package for pan-genome analysis, interactive visualization and exploration.3 KB (346 words) - 21:22, 6 December 2019
- [[Category:Software]]4 KB (567 words) - 16:12, 22 December 2022
- #REDIRECT [[Software Development Policies]]43 bytes (4 words) - 20:46, 6 June 2022
- [[Category:Software]]2 KB (293 words) - 15:41, 30 June 2023
- [[Category:Software]]10 members (1 subcategory, 0 files) - 18:36, 6 June 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]]2 KB (299 words) - 20:33, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (285 words) - 17:20, 15 August 2022
- [[Category:Software]]3 KB (379 words) - 20:06, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (305 words) - 22:10, 21 August 2022
- [[Category:Software]][[Category:Programming]][[Category:Shell]][[Category:Utility]]3 KB (327 words) - 20:24, 2 February 2024
- [[Category:Software]][[Category:Phylogenetics]]3 KB (321 words) - 21:24, 6 December 2019
- [[Category:Software]][[Category:Biology]][[Category:Sequencing]]2 KB (270 words) - 16:15, 10 June 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (309 words) - 16:24, 19 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]3 KB (358 words) - 21:22, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]2 KB (253 words) - 19:58, 23 May 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]]2 KB (262 words) - 20:36, 12 August 2022
- [[Category:Software]][[Category:Data Mining]]2 KB (280 words) - 19:12, 27 May 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (315 words) - 15:19, 4 May 2021
- [[Category:Software]][[Category:Chemistry]]3 KB (427 words) - 13:54, 6 June 2022
- [[Category:Software]][[Category:Library]][[Category:Math]]2 KB (302 words) - 21:22, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]2 KB (275 words) - 21:24, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]2 KB (252 words) - 20:24, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]3 KB (321 words) - 21:23, 6 December 2019
- [[Category:Software]][[Category:Biology]][[Category:Genomics]][[Category:NGS]]3 KB (343 words) - 18:21, 8 December 2023
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]2 KB (292 words) - 16:54, 22 August 2022
- [[Category:Software]][[Category:Math]][[Category:Library]][[Category:Compiler]]2 KB (290 words) - 14:58, 15 August 2022
- [[Category:Software]][[Category:Machine Learning]][[Category:Data Science]] ...ifferent software environments and examples with Nvidia Megatron and other software. NLP is involved in many other fields of AI, such as image recognition. Res3 KB (440 words) - 15:06, 26 September 2023
- [[Category:Software]][[Category:Biology]][[Category:NGS]] ...and 2) reduce reference bias as compared to mapping based approaches. The software is designed to work in situations where a whole-genome assembly is not the3 KB (430 words) - 14:32, 12 August 2022
- [[Category:Software]][[Category:biology]][[Category:genomics]]3 KB (335 words) - 17:50, 10 June 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]2 KB (284 words) - 21:22, 6 December 2019
- [[Category:Software]][[Category:Data_Science]]3 KB (425 words) - 14:43, 11 October 2023
- [[Category:Software]][[Category:Biology]][[Category:ChIP-Seq]] |{{#vardefine:url|http://home.gwu.edu/~wpeng/Software.htm}}2 KB (279 words) - 16:35, 10 June 2022
- [[Category:Software]][[Category:Biology]][[Category:genomics]]2 KB (274 words) - 18:13, 12 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]3 KB (385 words) - 19:47, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]] SimNIBS is a free and open source software package for the Simulation of Non-invasive Brain Stimulation. It allows for3 KB (324 words) - 18:04, 28 August 2020
- [[Category:Software]][[Category:Phylogenetics]]3 KB (312 words) - 15:28, 16 November 2021
- [[Category:software]][[Category:biology]][[Category:sequencing]]2 KB (275 words) - 00:33, 25 May 2023
- [[Category:Software]][[Category:Compiler]] ...for the GNU operating system. The GNU system was developed to be 100% free software, free in the sense that it respects the user's freedom.2 KB (298 words) - 20:44, 15 August 2022
- [[Category:Software]][[Category:Image Processing]] ...ts and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all step2 KB (289 words) - 21:24, 6 December 2019
- [[Category:Software]][[Category:Library]][[Category:Compiler]][[Category:Math]]2 KB (257 words) - 17:46, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (261 words) - 17:26, 22 August 2022
- [[Category:Software]][[Category:biology]][[Category:Sequencing]] ...hon installed on their computers or who do not have the ability to compile software also may choose to download packaged executable files. These files include4 KB (501 words) - 18:55, 6 June 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:sequencing]] |{{#vardefine:url|http://microbiology.se/software/metaxa2/}}3 KB (300 words) - 19:29, 18 August 2022
- [[Category:Software]][[Category:Phylogenetics]] ...lexible pipeline for genome-resolved metagenomic data analysis. If certain software wrapped into metaWRAP were integral to your investigation (e.g. Salmon, Max3 KB (412 words) - 22:31, 8 September 2020
- [[Category:Software]]2 KB (295 words) - 17:31, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]]3 KB (317 words) - 21:02, 21 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]]3 KB (333 words) - 20:44, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (282 words) - 21:21, 6 December 2019
- [[Category:Software]][[Category:Data Science]] The RAPIDS suite of open source software libraries and APIs gives you the ability to execute end-to-end data science3 KB (348 words) - 21:29, 21 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]]3 KB (333 words) - 19:27, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (267 words) - 21:15, 6 December 2019
- [[Category:Software]][[Category:Programming]][[Category:Library]][[Category:GPU]]3 KB (293 words) - 20:03, 21 August 2022
- [[Category:Biology]][[Category:Software]][[Category:Research]] Next Generation Sequencing Software and Documentation208 members (2 subcategories, 0 files) - 21:43, 24 October 2022
- [[Category:Software]][[Category:biology]][[Category:phylogenetics]]2 KB (238 words) - 14:34, 26 August 2020
- [[Category:Software]][[Category:Language]][[Category:Machine_Learning]]2 KB (272 words) - 20:14, 6 April 2023
- [[Category:Software]][[Category:Biology]][[Category:Assembly]] |{{#vardefine:url|http://www.sanger.ac.uk/resources/software/reapr/#t_2}}3 KB (320 words) - 21:35, 21 August 2022
- [[Category:Software]]2 KB (260 words) - 14:47, 28 July 2023
- [[Category:Software]]3 KB (317 words) - 20:03, 8 March 2022
- [[Category:Software]][[Category:Data Science]]3 KB (416 words) - 21:28, 13 October 2023
- [[Category:Software]][[Category:Phylogenetics]]2 KB (261 words) - 15:53, 21 June 2023
- [[Category:Software]][[Category:Phylogenetics]]2 KB (293 words) - 16:10, 10 March 2021
- [[Category:Software]][[Category:Phylogenetics]]3 KB (296 words) - 18:47, 3 June 2022
- [[Category:Software]][[Category:Audio]][[Category:Machine Learning]]2 KB (288 words) - 19:49, 15 August 2022
- [[Category:Software]][[Category:Chemistry]]2 KB (238 words) - 20:51, 18 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Sequencing]] fqtools is a software suite for fast processing of FASTQ files. Various file manipulations are su3 KB (359 words) - 16:47, 15 August 2022
- [[Category:Software]][[Category:genomics]][[Category:Biology]]3 KB (324 words) - 13:31, 15 August 2022
- [[Category:Software]]2 KB (304 words) - 16:29, 6 October 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (258 words) - 14:50, 27 April 2020
- [[Category:Software]][[Category:Phylogenetics]]3 KB (425 words) - 21:08, 13 January 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]3 KB (417 words) - 15:23, 12 August 2022
- [[Category:Software]][[Category:Programming]]2 KB (291 words) - 12:01, 26 August 2022
- [[Category:Software]][[Category:Phylogenetics]] ...Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol,3 KB (361 words) - 21:24, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]] ...lternative splicing analysis based on RNA-Seq alignment data. Briefly, the software takes a given annotation and RNA-Seq read alignments in standardized format3 KB (304 words) - 15:50, 22 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (364 words) - 21:24, 21 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]2 KB (277 words) - 16:34, 10 June 2022
- [[Category:Software]][[Category:Biology]][[Category:Metagenomics]]2 KB (290 words) - 18:14, 27 September 2023
- [[Category:Software]][[Category:Biology]][[Category:Spectroscopy]] Crux is a software toolkit for tandem mass spectrometry analysis, with a focus on peptide iden2 KB (293 words) - 18:39, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (325 words) - 14:40, 22 July 2020
- [[Category:Software]]3 KB (416 words) - 13:43, 7 April 2021
- [[Category:Software]][[Category:Chemistry]][[Category:Molecular Dynamics]]3 KB (318 words) - 18:35, 18 August 2022
- [[Category:Software]][[Category:Programming]][[Category:Performance Analysis]]2 KB (255 words) - 12:01, 26 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (255 words) - 21:23, 6 December 2019
- [[Category:Software]]9 members (0 subcategories, 0 files) - 16:17, 3 June 2022
- [[Category:Software]] [[Category:biology]][[Category:NGS]][[Category:sequencing]]3 KB (304 words) - 20:56, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (251 words) - 16:48, 27 May 2022
- [[Category:Software]]3 KB (299 words) - 20:02, 15 August 2022
- [[Category:Software]][[Category:Simulation]] COMSOL Multiphysics® is a general-purpose simulation software for modeling designs, devices, and processes in all fields of engineering,3 KB (426 words) - 19:40, 20 February 2024
- [[Category:Software]]2 KB (275 words) - 17:53, 15 August 2022
- [[Category:Software]][[Category:Climate]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->3 KB (350 words) - 19:34, 24 August 2022
- [[Category:Software]][[Category:Chemistry]] Please note that Gaussian is restricted software. Users who intend to use it must sign the '''Gaussian Confidentiality Agree6 KB (918 words) - 14:39, 8 March 2023
- [[Category:Software]][[Category:Math]][[Category:Language]] ...TLAB Runtime enable you to create and distribute numerical applications or software components quickly and securely.2 KB (292 words) - 18:06, 3 June 2022
- [[Category:Software]][[Category:Biology]][[Category:imaging]] ASHS is a software package for automatic segmentation of hippocampal subfields in MRI scans. A3 KB (353 words) - 20:32, 24 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]2 KB (275 words) - 17:20, 1 June 2022
- [[Category:Software]][[Category:Chemistry]][[Category:Biology]]2 KB (252 words) - 14:22, 11 October 2022
- [[Category: software]] [[Category: biology]] [[Category: Machine Learning]]3 KB (393 words) - 20:43, 22 February 2024