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• Ngsremix
  The method is implemented as a C/C++ commandline program.
  2 KB (259 words) - 21:49, 28 February 2023
• Dlib
  ...ing machine learning algorithms and tools for creating complex software in C++ to solve real world problems. See http://dlib.net for the main project do
  2 KB (269 words) - 13:11, 4 May 2020
• Armadillo
  Armadillo is a high quality C++ linear algebra library, aiming towards a good balance between speed and e ...://arma.sourceforge.net/armadillo_nicta_2010.pdf Armadillo: An Open Source C++ Linear Algebra Library for Fast Prototyping and Computationally Intensive
  2 KB (269 words) - 14:33, 12 August 2022
• SALSA
  A tool to scaffold long read assemblies with Hi-C Ghurye, J., Pop, M., Koren, S., Bickhart, D., & Chin, C. S. (2017). Scaffolding of long read assemblies using long range contact in
  2 KB (269 words) - 20:11, 24 August 2022
• SUNDIALS
  ...marsh, P. N. Brown, K. E. Grant, S. L. Lee, R. Serban, D. E. Shumaker, and C. S. Woodward, "SUNDIALS: Suite of Nonlinear and Differential/Algebraic Equa * R. Serban and A. C. Hindmarsh, "CVODES: the Sensitivity-Enabled ODE Solver in SUNDIALS," Proce
  3 KB (364 words) - 15:25, 19 August 2022
• ImageMagick
  ...re (C), MagickWand (C), ChMagick (Ch), ImageMagickObject (COM+), Magick++ (C++), JMagick (Java), L-Magick (Lisp), Lua, NMagick (Neko/haXe), Magick.NET (
  3 KB (380 words) - 18:46, 15 August 2022
• C-wap
  |{{#vardefine:app|c-wap}} |{{#vardefine:url|https://github.com/CFSAN-Biostatistics/C-WAP}}
  2 KB (281 words) - 13:16, 15 August 2022
• GRACKLE
  ...ry for astrophysical simulations and models. Grackle has interfaces for C, C++, Fortran, and Python codes and provides:
  2 KB (294 words) - 17:18, 15 August 2022
• BERTopic
  BERTopic is a topic modeling technique that leverages transformers and c-TF-IDF to create dense clusters allowing for easily interpretable topics wh [https://zenodo.org/record/4719700 BERTopic: Leveraging BERT and c-TF-IDF to create easily interpretable topics.]
  2 KB (283 words) - 14:00, 27 May 2022
• Panaroo
  ...dair N, Ruis C, Weimann A, Horesh G, Lees JA, Gladstone RA, Lo S, Beaudoin C, Floto RA, Frost SDW, Corander J, Bentley SD, Parkhill J. 2020. Producing p
  2 KB (289 words) - 19:33, 13 June 2023
• Deepfri
  ...ek, T., Leman, J. K., Berenberg, D., Vatanen, T., Chandler, C., Taylor, B. C., Fisk, I. M., Vlamakis, H., Xavier, R. J., Knight, R., Cho, K., & Bonneau,
  2 KB (290 words) - 19:30, 10 March 2023
• Plinkseq
  PLINK/SEQ is an open-source C/C++ library for working with human genetic variation data. The specific focus
  2 KB (296 words) - 20:25, 12 August 2022
• HOOMD
  J. A. Anderson, C. D. Lorenz, and A. Travesset. General purpose molecular dynamics simulation ...D. Nguyen, J. A. Anderson, P. Liu, F. Spiga, J. A. Millan, D. C. Morse, S. C. Glotzer. Strong scaling of general-purpose molecular dynamics simulations
  5 KB (607 words) - 15:40, 6 June 2022
• NetCDF
  ...e that the Fortran module man not have all supporting binaries that netcdf-c module has.
  3 KB (402 words) - 14:56, 12 March 2024
• GSL
  The GNU Scientific Library (GSL) is a numerical library for C and C++ programmers. It is free software under the GNU General
  2 KB (300 words) - 17:27, 15 August 2022
• OpenCV
  ...des several hundreds of computer vision algorithms. Written in optimized C/C++, the library can take advantage of multi-core processing. Enabled with Op
  2 KB (283 words) - 21:31, 6 December 2019
• Quantisnp
  ...M., Mirza, G., Butler, H., Clouston, P., Basset, A.S., Seller, A., Holmes, C., and Ragoussis, J. QuantiSNP: an Objective Bayes Hidden-Markov Model to de
  2 KB (297 words) - 20:29, 12 August 2022
• GEOS
  ...te (JTS). As such, it aims to contain the complete functionality of JTS in C++. This includes all the ​OpenGIS Simple Features for SQL spatial predica
  3 KB (307 words) - 17:05, 15 August 2022
• DCMTK
  ...orage and worklist servers. DCMTK is is written in a mixture of ANSI C and C++. It comes in complete source code and is made available as "open source"
  3 KB (304 words) - 20:31, 10 June 2022
• Pbmm2
  pbmm2 is a SMRT C++ wrapper for minimap2's C API. Its purpose is to support native PacBio in- and output, provide sets o
  3 KB (303 words) - 20:08, 31 May 2022

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