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  • [[Category:Software]][[Category:Library]] |{{#vardefine:url|http://www.gnu.org/software/gsl}}
    3 KB (309 words) - 21:12, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:NGS]] Newbler is a software package for de novo DNA sequence assembly. It is designed specifically for
    2 KB (290 words) - 21:22, 6 December 2019
  • [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]
    2 KB (271 words) - 21:29, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    3 KB (306 words) - 16:17, 23 January 2020
  • [[Category:Software]][[Category:Phylogenetics]]
    3 KB (351 words) - 14:47, 3 November 2020
  • [[Category:Software]]
    3 KB (308 words) - 21:22, 6 December 2019
  • [[Category:Software]][[Category:Computational Chemistry]][[Category:Molecular Dynamics]]
    2 KB (258 words) - 21:24, 6 December 2019
  • [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] ...ovo assembly, in addition to using the reference annotation. Necklace is a software pipeline to run genome-guided and de novo assembly and combine the resultin
    3 KB (312 words) - 21:22, 6 December 2019
  • [[Category:Software]]
    3 KB (362 words) - 21:31, 6 December 2019
  • [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] ...t/early/2017/07/03/159145 Laetsch, D. R., & Blaxter, M. L. (2017). KinFin: Software for taxon-aware analysis of clustered protein sequences. bioRxiv 10.1101/15
    2 KB (278 words) - 21:22, 6 December 2019
  • [[Category:Software]][[Category:Biology]][[Category:Data Conversion]]
    2 KB (254 words) - 21:21, 6 December 2019
  • [[Category:Software]][[Category:Library]] |{{#vardefine:url|http://hdfeos.org/software/pyhdf.php}}
    2 KB (249 words) - 21:24, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    2 KB (264 words) - 14:12, 6 April 2020
  • [[Category:Software]] ...and is also able to call external packages, and serve as plugins to other software such as LAMMPS, CP2K and also the python framework ASE. Various hybrid comb
    3 KB (313 words) - 17:40, 29 January 2021
  • [[Category:Software]][[Category:Biology]][[Category:Bioinformatics]][[Category:Phylogenetics]]
    2 KB (293 words) - 21:22, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    3 KB (332 words) - 21:09, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:Phylogenetics]]
    2 KB (279 words) - 21:22, 6 December 2019
  • [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]
    3 KB (347 words) - 21:22, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:Alignment]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->
    2 KB (295 words) - 21:21, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:Phylogenetics]] |{{#vardefine:url|http://abacus.gene.ucl.ac.uk/software.html}}
    2 KB (291 words) - 21:05, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    2 KB (270 words) - 18:20, 10 June 2020
  • [[Category:Software]]
    3 KB (335 words) - 18:36, 26 March 2021
  • [[Category:Software]][[Category:Biology]]
    2 KB (253 words) - 21:02, 6 December 2019
  • [[Category:Software]][[Category:Biology]][[Category:Genomics]] PolyPhen-2 (Polymorphism Phenotyping v2) is a software tool which predicts possible impact of amino acid substitutions on the stru
    2 KB (272 words) - 21:22, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    2 KB (271 words) - 21:21, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:Biology]]
    2 KB (237 words) - 21:23, 6 December 2019
  • [[Category:Software]][[Category:Motion Correction]] |{{#vardefine:url|http://cryoem.ucsf.edu/software/driftcorr.html}}
    2 KB (242 words) - 21:22, 6 December 2019
  • [[Category:Software]] Modeling software
    9 members (0 subcategories, 0 files) - 22:21, 29 February 2012
  • [[Category:Software]]
    3 KB (337 words) - 21:31, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    2 KB (254 words) - 21:58, 26 August 2020
  • [[Category:Software]][[Category:Phylogenetics]]
    3 KB (312 words) - 18:03, 10 May 2021
  • [[Category:Software]][[Category:Biology]][[Category:Genomics]]
    3 KB (306 words) - 21:24, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]]
    3 KB (302 words) - 21:23, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    3 KB (296 words) - 21:24, 6 December 2019
  • ...he processors can access other processor's memory only through network. In software sense, it means each processor only can see local machine memory directly a
    5 KB (823 words) - 14:04, 30 June 2017
  • [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]
    2 KB (264 words) - 21:23, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]] This interproscan software allows you to query your sequence against the InterPro databases.
    3 KB (332 words) - 21:21, 6 December 2019
  • [[Category:Software]][[Category:Chemistry]] |{{#vardefine:exe|1}} <!--Present manual instructions for running the software -->
    3 KB (473 words) - 21:31, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]] FastGEAR is a software for analyzing sequence alignments.
    2 KB (280 words) - 21:58, 27 August 2020
  • [[Category:Software]][[Category:Astronomy]]
    3 KB (317 words) - 15:15, 15 July 2021
  • [[Category:Software]][[Category:Astronomy]]
    2 KB (237 words) - 21:21, 6 December 2019
  • [[Category:Software]][[Category:Library]][[Category:Exchange]] |{{#vardefine:url|https://www.unidata.ucar.edu/software/netcdf/}}
    2 KB (270 words) - 04:32, 24 March 2021
  • [[Category:Software]][[Category:Phylogenetics]]
    2 KB (250 words) - 21:20, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:Phylogenetics]][[Category:Genomics]]
    3 KB (339 words) - 21:20, 6 December 2019
  • [[Category:Software]][[Category:compression]][[Category:library"]] XZ Utils is free general-purpose data compression software with a high compression ratio. XZ Utils were written for POSIX-like systems
    2 KB (287 words) - 21:29, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:Genomics]][[Category:NGS]] Stacks is a software pipeline for building loci out of a set of short-read sequenced samples. St
    4 KB (638 words) - 18:51, 9 June 2021
  • [[Category:Software]]
    2 KB (255 words) - 21:21, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    2 KB (241 words) - 14:31, 4 September 2020
  • ...:''' There is a known issue with the CIFS client in Mac Finder. The Finder software in current version of MacOS does not have a refresh button to update conten
    4 KB (705 words) - 18:32, 2 August 2021
  • [[Category:Software]][[Category:biology]][[Category:phylogenetics]][[Category:SNP]] kSNP v2 software for alignment-free SNP discovery and phylogenetics of hundreds
    3 KB (326 words) - 21:21, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    2 KB (256 words) - 21:29, 6 December 2019
  • [[Category:Software]][[Category:Biology]][[Category:SNP]]
    2 KB (269 words) - 21:24, 6 December 2019
  • [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]
    2 KB (280 words) - 21:29, 6 December 2019
  • [[Category:Software]][[Category:Molecular Dynamics]] |{{#vardefine:exe|1}} <!--Present manual instructions for running the software -->
    2 KB (280 words) - 21:21, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:NGS]] ...nts a substantial informatics challenge. VarScan is a platform-independent software tool developed at the Genome Institute at Washington University to detect v
    3 KB (321 words) - 21:29, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    2 KB (258 words) - 22:38, 8 September 2020
  • [[Category:Software]][[Category:Chemistry]] Zeo++ is a open source software for performing high-throughput geometry-based analysis of porous materials
    3 KB (395 words) - 20:11, 2 August 2021
  • [[Category:Software]][[Category:Biology]][[Category:Genomics]]
    2 KB (267 words) - 21:21, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]] ...quence blocks (alignment columns) commonly addressed by alignment trimming software.
    3 KB (317 words) - 21:24, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:Genomics]]
    2 KB (293 words) - 21:24, 6 December 2019
  • [[Category:Software]][[Category:Machine Learning]] |{{#vardefine:url|http://www.deeplearning.net/software/theano/}}
    3 KB (342 words) - 21:29, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:Genomics]]
    2 KB (281 words) - 21:19, 6 December 2019
  • [[Category:Software]][[Category:Biology]][[Category:Bioinformatics]][[Category:NGS]]
    2 KB (285 words) - 21:11, 6 December 2019
  • [[Category:Software]][[Category:library]][[Category:development]][[Category:C++]][[Category:pyt ...ort its parse tree in the form of XML and Lisp s-expressions. SWIG is free software and the code that SWIG generates is compatible with both commercial and non
    3 KB (416 words) - 21:24, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    3 KB (301 words) - 13:53, 16 September 2021
  • [[Category:Software]][[Category:Biology]][[Category:Bioinformatics]][[Category:NGS]] This module enables the use of the eXpress software
    3 KB (382 words) - 21:20, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:NGS]] |{{#vardefine:url|http://www.ebi.ac.uk/bertone/software.html}}
    2 KB (226 words) - 21:22, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    2 KB (293 words) - 16:10, 10 March 2021
  • [[Category:Software]][[Category:Phylogenetics]]
    3 KB (392 words) - 15:33, 16 November 2020
  • [[Category:Software]][[Category:biology]][[Category:bioinformatics]][[Category:genomics]]
    2 KB (246 words) - 21:24, 6 December 2019
  • [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]
    2 KB (299 words) - 21:20, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:Phylogenetics]] |{{#vardefine:url|http://pbil.univ-lyon1.fr/software/phyldog}}
    2 KB (288 words) - 21:23, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:Neuroimaging]]
    3 KB (340 words) - 21:29, 6 December 2019
  • [[Category:Software]][[Category:Library]]
    2 KB (259 words) - 21:24, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    3 KB (305 words) - 13:52, 23 September 2021
  • [[Category:Software]][[Category:Bioinformatics]][[Category:Phylogenetics]] |{{#vardefine:url|http://phylo.bio.ku.edu/software/sate/sate2.html}}
    6 KB (820 words) - 21:24, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]] If you publish the results of Abricate please cite both the software and the appropriate database you used with --db
    3 KB (314 words) - 17:27, 27 April 2020
  • [[Category:Software]][[Category:Phylogenetics]]
    2 KB (252 words) - 14:27, 17 February 2021
  • [[Category:Software]][[Category:Biology]] software. The isoform sequencing (Iso-Seq) application generates full-length
    3 KB (392 words) - 21:29, 6 December 2019
  • [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]
    2 KB (280 words) - 21:22, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    2 KB (267 words) - 21:15, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:NGS]]
    3 KB (356 words) - 21:24, 6 December 2019
  • [[Category:Software]][[Category:Biology]][[Category:SNP]] |{{#vardefine:url|http://cmpg.unibe.ch/software/BayeScan/index.html}}
    3 KB (399 words) - 21:19, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->
    3 KB (391 words) - 21:21, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:Genomics]]
    2 KB (254 words) - 21:05, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    2 KB (288 words) - 13:25, 23 July 2020
  • [[Category:Software]][[Category:Phylogenetics]] Open3D is an open-source library that supports rapid development of software that deals with 3D data. The Open3D frontend exposes a set of carefully sel
    3 KB (356 words) - 18:14, 15 April 2021
  • [[Category:Software]][[Category:Bioinformatics]][[Category:Genomics]]
    2 KB (301 words) - 21:21, 6 December 2019
  • [[Category:Software]]
    2 KB (245 words) - 21:20, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]]
    3 KB (400 words) - 21:24, 6 December 2019
  • [[Category:Software]][[Category:Biology]][[Category:Bioinformatics]]
    3 KB (327 words) - 21:24, 6 December 2019
  • [[Category:Software]][[Category:Biology]][[Category:Bioinformatics]]
    2 KB (236 words) - 21:21, 6 December 2019
  • [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]
    2 KB (254 words) - 21:20, 6 December 2019
  • [[Category:Software]][[Category:Bioinformatics]][[Category:NGS]]
    3 KB (350 words) - 21:21, 6 December 2019
  • [[Category:Software]][[Category:Chemistry]] CP2K is a quantum chemistry and solid state physics software package that can perform atomistic simulations of solid state, liquid, mole
    3 KB (371 words) - 22:15, 26 August 2020
  • [[Category:Software]]
    3 KB (359 words) - 16:36, 29 June 2021
  • [[Category:Software]][[Category:Phylogenetics]]
    2 KB (288 words) - 21:22, 6 December 2019
  • [[Category:Software]][[Category:Modeling]]
    3 KB (439 words) - 21:23, 6 December 2019
  • [[Category:Software]][[Category:Phylogenetics]] panX is a software package for pan-genome analysis, interactive visualization and exploration.
    3 KB (346 words) - 21:22, 6 December 2019
  • [[Category:Software]]
    2 KB (277 words) - 21:29, 6 December 2019

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