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- Or you can browse through the sub-categories or software package names in the table below. To add a documentation page for a new piece of software installed into /apps please go to [[Add New App Page]].2,123 members (62 subcategories, 0 files) - 19:53, 20 February 2024
- 26 bytes (2 words) - 17:41, 28 September 2017
- #REDIRECT [[Software Development Policies]]43 bytes (4 words) - 20:46, 6 June 2022
- ==External Software Components== ...d to get a security review or risk assessment for such software. Only when software is exposed to the outside world, e.g. as part of PubApps, will a security r533 bytes (84 words) - 15:43, 19 August 2022
- ==Availabile Linux Software installed in ResVault==2 KB (262 words) - 18:47, 20 February 2023
Page text matches
- [[Category:Software]][[Category:Phylogenetics]] ...is not intended to be used as a final annotation or all-in-one tool; this software simply offers the user another view of complex metagenomic data. Users are3 KB (336 words) - 14:51, 20 January 2021
- [[Category:Software]][[Category:Biology]][[Category:Genomics]] |{{#vardefine:exe|1}} <!--Present manual instructions for running the software -->3 KB (402 words) - 18:17, 12 August 2022
- [[Category:Software]]2 KB (236 words) - 14:39, 27 January 2023
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]3 KB (358 words) - 21:21, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]2 KB (254 words) - 22:26, 8 September 2020
- [[Category:Software]][[Category:Biology]][[Category:NGS]] This module enables the use of the eXpress software3 KB (383 words) - 18:53, 12 August 2022
- [[Category:Software]][[Category:biology]][[Category:genomics]]3 KB (390 words) - 20:54, 12 August 2022
- [[Category:Software]]10 members (1 subcategory, 0 files) - 18:36, 6 June 2022
- [[Category:Software]][[Category:Library]] ...M. Lozhnikov, Y. Mentekidis, S. Ghaisas, S. Zhang. Journal of Open Source Software 3:26, 2018.]3 KB (301 words) - 19:43, 15 December 2020
- [[Category:Software]][[Category:Phylogenetics]]3 KB (319 words) - 20:03, 15 August 2022
- [[Category:Software]][[Category:NGS]][[Category:Biology]][[Category:Sequencing]] |{{#vardefine:exe|1}} <!--Present manual instructions for running the software -->3 KB (366 words) - 16:39, 22 August 2022
- [[Category:Software]][[Category:Biology]]2 KB (262 words) - 21:29, 21 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]2 KB (251 words) - 21:21, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]3 KB (359 words) - 17:28, 27 May 2022
- [[Category:Software]][[Category:Biology]]2 KB (256 words) - 20:07, 6 April 2023
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]][[Category:NGS]]3 KB (415 words) - 15:08, 12 August 2022
- [[Category:Software]][[Category:biology]]2 KB (267 words) - 20:41, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (253 words) - 19:58, 23 May 2022
- [[Category:Software]][[Category:Biology]]2 KB (234 words) - 14:36, 7 April 2023
- [[Category:Software]]3 KB (449 words) - 19:28, 12 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]] |{{#vardefine:exe|1}} <!--Present manual instructions for running the software -->2 KB (320 words) - 18:54, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (324 words) - 18:29, 18 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (240 words) - 18:34, 31 May 2022
- [[Category:Software]][[Category:Shell]][[Category:Workflow Automation]] |{{#vardefine:url|http://www.gnu.org/software/parallel/}}3 KB (334 words) - 16:46, 21 August 2022
- [[Category:Software]][[Category:Scheduler Apps]]2 KB (235 words) - 18:29, 11 November 2022
- [[Category:Software]][[Category:Machine Learning]][[Category:Artificial Intelligence]]2 KB (280 words) - 19:05, 1 December 2023
- [[Category:Software]][[Category:Phylogenetics]]2 KB (254 words) - 18:00, 11 March 2020
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] |{{#vardefine:url|http://abacus.gene.ucl.ac.uk/software.html}}2 KB (294 words) - 18:21, 12 August 2022
- [[Category:Software]][[Category:Machine Learning]][[Category:Data Science]] ...ifferent software environments and examples with Nvidia Megatron and other software. NLP is involved in many other fields of AI, such as image recognition. Res3 KB (440 words) - 15:06, 26 September 2023
- [[Category:Software]][[Category:Phylogenetics]]3 KB (329 words) - 21:03, 12 February 2021
- [[Category:Software]][[Category:Biology]][[Category:Genomics]] |{{#vardefine:exe|1}} <!--Present manual instructions for running the software -->2 KB (298 words) - 18:54, 12 August 2022
- [[Category:Software]] ...tion, visual effects, motion graphics and audio post production all in one software tool.2 KB (261 words) - 13:59, 25 July 2023
- [[Category:Software]][[Category:Biology]][[Category:Variant Calling]] 4P (Parallel Processing of Polymorphism Panels) is a software for computing2 KB (285 words) - 20:36, 11 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]]3 KB (349 words) - 19:36, 21 August 2022
- [[Category:Software]][[Category:Math]] Dynare is a software platform for handling a wide class of economic models, in particular dynami3 KB (382 words) - 21:20, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]2 KB (247 words) - 15:07, 20 May 2020
- [[Category:Software]][[Category:Biology]] ...Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol,3 KB (321 words) - 12:00, 19 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (312 words) - 15:28, 16 November 2021
- [[Category:Software]][[Category:Phylogenetics]]2 KB (283 words) - 21:11, 6 December 2019
- [[Category:Software]][[Category:NGS]][[Category:Biology]][[Category:Mapping]] PerM is a software package which was designed to perform highly efficient genome scale alignme3 KB (396 words) - 17:40, 21 August 2022
- [[Category:Software]][[Category:Data Science]][[Category:Math]] |{{#vardefine:url|http://www.phidot.org/software/mark/index.html}}2 KB (329 words) - 18:22, 18 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]] bcl2fastq conversion software can be used to both demultiplex data and3 KB (328 words) - 18:12, 12 August 2022
- [[Category:Software]][[Category:biology]]2 KB (244 words) - 20:16, 12 August 2022
- [[Category:Software]]3 KB (356 words) - 20:27, 12 August 2022
- [[Category:Software]][[Category:Math]] This is a GUI software. Follow the instructions at https://wiki.rc.ufl.edu/doc/GUI_Programs2 KB (298 words) - 21:21, 6 December 2019
- [[Category:Software]]2 KB (268 words) - 20:58, 24 February 2023
- [[Category:Software]]2 KB (295 words) - 17:31, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (365 words) - 21:19, 6 December 2019
- [[Category:Software]][[Category:Genomics]]3 KB (342 words) - 22:51, 30 November 2022
- [[Category:Software]][[Category:Programming]]2 KB (229 words) - 12:24, 26 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Variant Calling]]2 KB (270 words) - 12:56, 15 August 2022
- [[Category:Software]][[Category:Chemistry]][[Category:Molecular Dynamics]]4 KB (556 words) - 19:16, 5 January 2023
- [[Category:Software]][[Category:Phylogenetics]] ...eleased in 2000, as a complete overhaul of the Electron Gamma Shower (EGS) software package originally developed at the Stanford Linear Accelerator Center (SLA3 KB (327 words) - 14:57, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]]2 KB (273 words) - 18:12, 12 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]2 KB (251 words) - 21:22, 6 December 2019
- [[Category:Software]][[Category:genomics]][[Category:Biology]]3 KB (341 words) - 13:31, 15 August 2022
- [[Category:Software]][[Category:Alignment]][[Category:Sequencing]][[Category:Phylogenetics]] Please cite the following papers if you use Armadillo in your research and/or software.3 KB (374 words) - 15:10, 1 June 2022
- [[Category:Software]][[Category: Geospatial]][[Category:Climate]][[Category:Visualization]][[Ca |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->3 KB (359 words) - 20:26, 24 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Sequencing]][[Category:NGS]]3 KB (311 words) - 18:57, 12 August 2022
- [[Category:Software]]42 members (0 subcategories, 0 files) - 21:45, 24 October 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] WhatsHap is a software for phasing genomic variants using DNA sequencing reads, also called read-b2 KB (269 words) - 21:29, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]3 KB (348 words) - 22:26, 27 August 2020
- [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Sequencing]]4 KB (489 words) - 12:01, 19 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]]2 KB (284 words) - 19:30, 12 August 2022
- [[Category:Software]][[Category:genomics]][[Category:Biology]]2 KB (260 words) - 13:31, 15 August 2022
- ==[[:Category:Applications|Software and Reference Data]] [[Image:Software.png|left|frameless|upright=0.1]]==4 KB (522 words) - 17:49, 31 January 2023
- [[Category:Software]][[Category:Phylogenetics]]3 KB (305 words) - 14:20, 15 September 2020
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]][[Category:NGS]]2 KB (277 words) - 21:21, 6 December 2019
- [[Category:Software]][[Category:genomics]][[Category:Biology]]3 KB (324 words) - 13:31, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (239 words) - 18:47, 1 June 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]]4 KB (522 words) - 20:52, 12 August 2022
- [[Category:Software]]4 KB (495 words) - 19:45, 18 August 2022
- ...app module name e.g. "foo" into the text box and click on the "Create new software page" button. Edit the resulting page as necessary.245 bytes (44 words) - 17:34, 3 June 2022
- [[Category:Software]][[Category:Library]]2 KB (259 words) - 21:24, 6 December 2019
- [[Category:Software]][[Category:Alignment]][[Category:Biology]][[Category:Genomics]]3 KB (365 words) - 20:51, 29 June 2023
- [[Category:Software]][[Category:Phylogenetics]]2 KB (275 words) - 22:40, 8 September 2020
- [[Category:Software]][[Category:Biology]][[Category:NGS]]3 KB (309 words) - 17:07, 21 August 2022
- [[Category:Software]][[Category:biology]] |{{#vardefine:url|http://www.cibiv.at/software/triplec/}}3 KB (308 words) - 20:52, 12 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Metagenomics]]2 KB (290 words) - 18:14, 27 September 2023
- [[Category:Software]][[Category:GPU]]2 KB (272 words) - 21:05, 31 May 2023
- [[Category:Software]][[Category:Machine Learning]]2 KB (289 words) - 23:52, 31 January 2023
- [[Category:Software]][[Category:Biology]][[Category:NGS]] |{{#vardefine:url|http://www.broadinstitute.org/software/allpaths-lg/blog/}}2 KB (299 words) - 12:36, 12 August 2022
- [[Category:Software]][[Category:Chemistry]][[Category:Molecular Dynamics]]2 KB (290 words) - 15:30, 19 August 2022
- [[Category:Software]][[Category:Language]]3 KB (305 words) - 19:05, 6 June 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (315 words) - 20:18, 1 October 2020
- [[Category:Software]][[Category:Biology]][[Category:Genomics]] Meta-Tissue is a free software for identifying eQTLs from multiple tissues. It uses meta-analysis to combi3 KB (327 words) - 14:57, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]] MELTING is a software to compute, for a nucleic acid duplex, the enthalpy and the entropy of the3 KB (306 words) - 19:50, 12 August 2022
- [[Category:Software]][[Category:biology]][[Category:NGS]]3 KB (381 words) - 20:35, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (251 words) - 16:48, 27 May 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (248 words) - 17:11, 15 August 2022
- [[Category:Software]]2 KB (275 words) - 17:53, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (253 words) - 18:17, 1 June 2022
- [[Category:Software]][[Category:Math]]2 KB (281 words) - 19:51, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]3 KB (306 words) - 17:00, 10 June 2022
- [[Category:Software]][[Category:Sequencing]][[Category:Biology]]2 KB (241 words) - 18:49, 12 August 2022
- [[Category:Software]] ...stry breakpoints in large genome-wide SNP datasets. Journal of Open Source Software, 5(46), 2030, https://doi.org/10.21105/joss.020302 KB (266 words) - 19:05, 28 June 2023
- [[Category:Software]]2 KB (287 words) - 20:25, 21 February 2024
- [[Category:Software]][[Category:Phylogenetics]]2 KB (257 words) - 18:50, 27 May 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] |{{#vardefine:url|http://abacus.gene.ucl.ac.uk/software/paml.html}}3 KB (367 words) - 20:12, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (317 words) - 13:08, 6 June 2022