Difference between revisions of "Skmer"
Jump to navigation
Jump to search
| Line 1: | Line 1: | ||
| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:genomics]][[Category:Biology]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|skmer}} | |{{#vardefine:app|skmer}} | ||
Latest revision as of 13:31, 15 August 2022
Description
Skmer is a fast tool for estimating distances between genomes from low-coverage sequencing reads (genome-skims), without needing any assembly or alignment step.
Environment Modules
Run module spider skmer to find out what environment modules are available for this application.
System Variables
- HPC_SKMER_DIR - installation directory
- HPC_SKMER_BIN - executable directory