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scythe website  

Scythe uses a Naive Bayesian approach to classify contaminant substrings in sequence reads. It considers quality information, which can make it robust in picking out 3'-end adapters, which often include poor quality bases.

Environment Modules

Run module spider scythe to find out what environment modules are available for this application.

System Variables

  • HPC_SCYTHE_DIR - installation directory