Scythe
Jump to navigation
Jump to search
Description
Scythe uses a Naive Bayesian approach to classify contaminant substrings in sequence reads. It considers quality information, which can make it robust in picking out 3'-end adapters, which often include poor quality bases.
Required Modules
Serial
- scythe
System Variables
- HPC_{{#uppercase:scythe}}_DIR - installation directory
Validation
- Validated 4/5/2018