Difference between revisions of "Scalpel"

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m (Text replacement - "#uppercase" to "uc")
 
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<!--Modules-->
 
<!--Modules-->
==Required Modules==
+
==Environment Modules==
===Serial===
+
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
* {{#var:app}}
 
<!--
 
===Parallel (OpenMP)===
 
* intel
 
* {{#var:app}}
 
===Parallel (MPI)===
 
* intel
 
* openmpi
 
* {{#var:app}}
 
-->
 
 
==System Variables==
 
==System Variables==
 
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
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<!--Turn the Table of Contents and Edit paragraph links ON/OFF-->
 
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__NOTOC____NOEDITSECTION__
 
__NOTOC____NOEDITSECTION__
=Validation=
 
* Validated 4/5/2018
 

Latest revision as of 19:49, 10 June 2022

Description

scalpel website  

Bioinformatics pipeline for discovery of genetic variants from NGS reads.

Environment Modules

Run module spider scalpel to find out what environment modules are available for this application.

System Variables

  • HPC_SCALPEL_DIR - installation directory