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SNAPE-pooled computes the probability distribution for the frequency of the minor allele in a certain population, at a certain position in the genome. Obviously if this probability is high enough, then you have a segregating position, a.k.a. SNP.

Environment Modules

Run module spider spane to find out what environment modules are available for this application.

System Variables

  • HPC_{{#uppercase:spane}}_DIR - installation directory