Difference between revisions of "SNeP"
Jump to navigation
Jump to search
| Line 1: | Line 1: | ||
| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:Biology]][[Category:Phylogenics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|snep}} | |{{#vardefine:app|snep}} | ||
Revision as of 18:06, 7 July 2017
Description
SNeP is a piece of software written in C++ that performs historical Effective Population Size (Ne) trajectories estimation through Linkage Disequilibrium (LD). Calculations are based on genome-wide genotype data.
Required Modules
Serial
- snep
System Variables
- HPC_{{#uppercase:snep}}_DIR - installation directory
Citation
If you publish research that uses snep you have to cite it as follows: