Difference between revisions of "SIFT"

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==System Variables==
 
==System Variables==
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
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Revision as of 21:24, 6 December 2019

Description

sift website  

SIFT predicts whether an amino acid substitution affects protein function. SIFT prediction is based on the degree of conservation of amino acid residues in sequence alignments derived from closely related sequences, collected through PSI-BLAST. SIFT can be applied to naturally occurring nonsynonymous polymorphisms or laboratory-induced missense mutations.

Required Modules

modules documentation

Serial

  • sift

System Variables

  • HPC_SIFT_DIR - installation directory






Validation

  • Validated 4/5/2018