SHRiMP

From UFRC
Revision as of 21:24, 6 December 2019 by Moskalenko (talk | contribs) (Text replacement - "#uppercase" to "uc")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigation Jump to search

Description

shrimp website  

SHRiMP is a software package for aligning genomic reads against a target genome. It was primarily developed with the multitudinous short reads of next generation sequencing machines in mind, as well as Applied Biosystem's colourspace genomic representation.

Required Modules

Serial

  • shrimp

System Variables

  • HPC_SHRIMP_DIR





Validation

  • Validated 4/5/2018