SHAPEIT
Revision as of 21:24, 6 December 2019 by Moskalenko (talk | contribs) (Text replacement - "#uppercase" to "uc")
Description
SHAPEIT is a fast and accurate method for estimation of haplotypes (aka phasing) from genotype or sequencing data.
Required Modules
Serial
- shapeit
System Variables
- HPC_SHAPEIT_DIR - installation directory
Citation
If you publish research that uses shapeit you have to cite it as follows:
https://mathgen.stats.ox.ac.uk/genetics_software/shapeit/shapeit.html#citations
Validation
- Validate 4/5/2018