Difference between revisions of "Rnastar"

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(Created page with "Category:SoftwareCategory:biologyCategory:ngsCategory:rna-seq {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|rnastar}} |{{#vardefine:url|https://github.com...")
 
m (Text replacement - "#uppercase" to "uc")
 
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_DOC - documentation directory
+
* HPC_{{uc:{{#var:app}}}}_DOC - documentation directory
 
* RNASTAR_INDEXES - documentation directory
 
* RNASTAR_INDEXES - documentation directory
 
<!--Configuration-->
 
<!--Configuration-->

Latest revision as of 21:24, 6 December 2019

Description

rnastar website  

STAR is an ultrafast universal RNA-seq aligner

Environment Modules

Run module spider rnastar to find out what environment modules are available for this application.

System Variables

  • HPC_RNASTAR_DIR - installation directory
  • HPC_RNASTAR_DOC - documentation directory
  • RNASTAR_INDEXES - documentation directory