Difference between revisions of "Regtools"
Jump to navigation
Jump to search
(Created page with "Category:SoftwareCategory:BiologyCategory:RNA-seq {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|regtools}} |{{#vardefine:url|https://github.com/griffithlab/re...") |
Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
||
| (One intermediate revision by one other user not shown) | |||
| Line 1: | Line 1: | ||
| − | [[Category:Software]][[Category:Biology]][[Category:RNA- | + | [[Category:Software]][[Category:Biology]][[Category:RNA-Seq]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|regtools}} | |{{#vardefine:app|regtools}} | ||
| Line 36: | Line 36: | ||
--> | --> | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 21:24, 6 December 2019
Description
Regtools is a set of tools that integrate DNA-seq and RNA-seq data to help interpret mutations in a regulatory and splicing context.
Required Modules
Serial
- gcc/5.2.0
- regtools
System Variables
- HPC_REGTOOLS_DIR - installation directory