Difference between revisions of "R Job Script"
Jump to navigation
Jump to search
Moskalenko (talk | contribs) |
Moskalenko (talk | contribs) |
||
Line 15: | Line 15: | ||
date; hostname; pwd | date; hostname; pwd | ||
#Use modules to load the environment for R | #Use modules to load the environment for R | ||
− | module load R | + | module load gcc R |
#Run R script | #Run R script | ||
Rscript myRscript.R | Rscript myRscript.R | ||
</source> | </source> |
Revision as of 14:00, 30 June 2017
#!/bin/bash
#SBATCH --job-name=prime_threaded #Job name
#SBATCH --mail-type=ALL # Mail events (NONE, BEGIN, END, FAIL, ALL)
#SBATCH --mail-user=ENTER_YOUR_EMAIL_HERE # Where to send mail
#SBATCH --cpus-per-task=4 # Number of cores for multi-threaded ojbs
#SBATCH --mem-per-cpu=1gb # Per processor memory
#SBATCH -t 00:05:00 # Walltime
#SBATCH -o prime_threaded.%j.out # Name output file
#Record the time and compute node the job ran on
date; hostname; pwd
#Use modules to load the environment for R
module load gcc R
#Run R script
Rscript myRscript.R