RADICAL
Revision as of 20:08, 28 November 2012 by Moskalenko (talk | contribs)
Description
RADICAL stands for Random Addition Concatenation Analysis. It concatenates randomly selected gene partitions and builds phylogenetic trees (MP with PAUP*/ML with RAxML) to examine tree-to-tree agreement of the concatenation path. Also calculates ML support per node and partition. See Narechania et al. (2011 Genome Biol Evol).
Required Modules
Serial
- radical
System Variables
- HPC_{{#uppercase:radical}}_DIR