RADICAL

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[[Category:BioInformatis]

Description

radical website  

RADICAL stands for Random Addition Concatenation Analysis. It concatenates randomly selected gene partitions and builds phylogenetic trees (MP with PAUP*/ML with RAxML) to examine tree-to-tree agreement of the concatenation path. Also calculates ML support per node and partition. See Narechania et al. (2011 Genome Biol Evol).

Required Modules

Serial

  • radical

System Variables

  • HPC_{{#uppercase:radical}}_DIR