Difference between revisions of "Quantas"
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 21:24, 6 December 2019
Description
Quantas: A pipeline to analyze alternative splicing using RNA-Seq
Required Modules
Serial
- Qauntas
Parallel (OpenMP)
- intel
- Qauntas
Parallel (MPI)
- intel
- openmpi
- Qauntas
System Variables
- HPC_QAUNTAS_DIR - installation directory
Citation
If you publish research that uses Qauntas you have to cite it as follows:
http://zhanglab.c2b2.columbia.edu/index.php/Publications
Validation
- Validate 4/5/2018