Pseudofinder is a bioinformatics tool that detects pseudogene candidates from annotated genbank files of bacterial and archaeal genomes.
It has been tested mostly on genbank (.gbf/.gbk) files annotated by Prokka with the --compliant flag (i.e. including both /gene and /CDS annotations).
module spider pseudofinder to find out what environment modules are available for this application.
- HPC_PSEUDOFINDER_DIR - installation directory
If you publish research that uses pseudofinder you have to cite it as follows: