Difference between revisions of "Proteinortho"

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<!--Add additional HPC_FOO_BIN and other ENV VARIABLES below-->
<!--Add additional HPC_FOO_BIN and other ENV VARIABLES below-->
==System Variables==
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory

Latest revision as of 21:22, 6 December 2019


proteinortho website  

Computation of genome-wide orthology data.

The program Proteinortho is a stand-alone tool that is geared towards large datasets and makes use of distributed computing techniques when run on multi-core hardware. It implements an extended version of the reciprocal best alignment heuristic.

Required Modules

modules documentation


  • proteinortho

System Variables

  • HPC_PROTEINORTHO_DIR - installation directory


  • Validated 4/5/2018