Difference between revisions of "Preseq"
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Revision as of 18:36, 5 April 2018
Description
The preseq package is aimed at predicting and estimating the complexity of a genomic sequencing library, equivalent to predicting and estimating the number of redundant reads from a given sequencing depth and how many will be expected from additional sequencing using an initial sequencing experiment. The estimates can then be used to examine the utility of further sequencing, optimize the sequencing depth, or to screen multiple libraries to avoid low complexity samples.
Required Modules
Serial
- preseq
System Variables
- HPC_{{#uppercase:preseq}}_DIR
Validation
- Validated 4/5/2018