Piranha

From UFRC
Jump to navigation Jump to search
The printable version is no longer supported and may have rendering errors. Please update your browser bookmarks and please use the default browser print function instead.

Description

piranha website  

Piranha is a peak-caller for CLIP- and RIP-Seq data. It takes input in BED or BAM format and identifies regions of statistically significant read enrichment. Additional covariates may optionally be provided to further inform the peak-calling process.

Environment Modules

Run module spider piranha to find out what environment modules are available for this application.

System Variables

  • HPC_PIRANHA_DIR - installation directory