Difference between revisions of "Pbcore"

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(Created page with "Category:SoftwareCategory:biologyCategory:bioinformatics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|pbcore}} |{{#vardefine:url|http://loco.biosci.arizona.e...")
 
m (Text replacement - "#uppercase" to "uc")
Line 24: Line 24:
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
+
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
 
<!--Configuration-->
 
<!--Configuration-->
 
{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Revision as of 21:23, 6 December 2019

Description

pbcore website  

python package for interacting with PacBio data

Environment Modules

Run module spider pbcore to find out what environment modules are available for this application.

System Variables

  • HPC_PBCORE_DIR - installation directory
  • HPC_PBCORE_BIN - executable directory