Difference between revisions of "OrthoFinder"
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Revision as of 21:22, 6 December 2019
Description
OrthoFinder is a program for identifying orthologous protein sequence families. It is written in python and runs as a single command that takes as input a directory of FASTA files, one per species. It outputs a file containing the orthologous groups of genes from these species.
Required Modules
Serial
- orthofinder
System Variables
- HPC_ORTHOFINDER_DIR - installation directory
Validation
- Validated 4/5/2018