Newick utils
(Redirected from Newick-utils)
Jump to navigation
Jump to search
The printable version is no longer supported and may have rendering errors. Please update your browser bookmarks and please use the default browser print function instead.
Description
Original website: http://cegg.unige.ch/newick_utils
Archived: https://web.archive.org/web/20210409163921/http://cegg.unige.ch/newick_utils
The Newick Utilities are a suite of programs for working with Newick-formatted phylogenetic trees.
Environment Modules
Run module spider newick_utils to find out what environment modules are available for this application.
System Variables
- HPC_NEWICK_UTILS_DIR - installation directory
- HPC_NEWICK_UTILS_BIN - executable directory
Citation
If you publish research that uses newick_utils you have to cite it as follows:
The Newick Utilities: High-throughput Phylogenetic tree Processing in the UNIX Shell. Thomas Junier and Evgeny M. Zdobnov. Bioinformatics 2010 26:1669-1670
http://bioinformatics.oxfordjournals.org/content/26/13/1669.full
doi:10.1093/bioinformatics/btq243