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msfinder website  

Universal program for compound ‘annotation’ that supports EI-MS (GC/MS) and MS/MS spectral mining.

Environment Modules

Run module spider msfinder to find out what environment modules are available for this application.

System Variables

  • HPC_MSFINDER_DIR - installation directory


If you publish research that uses msfinder you have to cite it as follows:

Hydrogen rearrangement rules: computational MS/MS fragmentation and structure elucidation using MS-FINDER software. Analytical Chemistry 88, 7946-7958, 2016.

Identifying metabolites by integrating metabolome databases with mass spectrometry cheminformatics. Nature Methods, 15, 53-56, 2018