Difference between revisions of "Monai"

Revision as of 00:21, 26 October 2021

Description

The MONAI framework is the open-source foundation being created by Project MONAI. MONAI is a freely available, community-supported, PyTorch-based framework for deep learning in healthcare imaging. It provides domain-optimized foundational capabilities for developing healthcare imaging training workflows in a native PyTorch paradigm.

Project MONAI also includes MONAI Label, an intelligent open source image labeling and learning tool that helps researchers and clinicians collaborate, create annotated datasets, and build AI models in a standardized MONAI paradigm.

Environment Modules

Run module spider monai to find out what environment modules are available for this application.

System Variables

HPC_MONAI_DIR - installation directory
HPC_MONAI_BIN - executable directory
HPC_MONAI_LIB - library directory

Learning Materials

MONAI 3-day Bootcamp Recordings and Learning Materials

Bootcamp Playlist

MONAI YouTube

MONAI Stream

MONAI Deploy App SDK

Spleen Segmentation Overview

Spleen Segmentation Deepdive

MedNIST Classification

MONAI Packages

If you would like to install MONAI on your own platforms, here are some useful links:

MONAI Core

MONAI Label

MONAI Deploy App SDK

@@ Line 28: / Line 28: @@
 * HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 * HPC_{{uc:{{#var:app}}}}_BIN - executable directory
+* HPC_{{uc:{{#var:app}}}}_LIB - library directory
+==Learning Materials==
+=== MONAI 3-day Bootcamp Recordings and Learning Materials ===
+* [https://urldefense.proofpoint.com/v2/url?u=https-3A__www.youtube.com_playlist-3Flist-3DPLtoSVSQ2XzyCobzE6NvwjNpITsQyPUtfs&d=DwMGaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=NSXeOzyqbRdsXM127ZiphQ&m=e1aztAOhx1tyaakucfLf_fPfneoSqzwX6c1D_MpVwvY&s=u-HgmwAUKaQ8wM-Mbt-ePxWJczHlPy4DqujxvvNYrI8&e= Bootcamp Playlist]
+* [https://urldefense.proofpoint.com/v2/url?u=https-3A__www.youtube.com_c_Project-2DMONAI&d=DwMGaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=NSXeOzyqbRdsXM127ZiphQ&m=e1aztAOhx1tyaakucfLf_fPfneoSqzwX6c1D_MpVwvY&s=rP_ldLcdRJ6w3fDCh4I0sWuf60WKRUijOsfFYLHxbEk&e= MONAI YouTube]
+* [https://urldefense.proofpoint.com/v2/url?u=https-3A__www.youtube.com_watch-3Fv-3DdbYrpdgB6xs&d=DwMGaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=NSXeOzyqbRdsXM127ZiphQ&m=e1aztAOhx1tyaakucfLf_fPfneoSqzwX6c1D_MpVwvY&s=XXAdVEt6MkxyY3wCf5Bmqm6nDKeeqJrVwzU9sZczg2I&e= MONAI Stream]
+=== MONAI Deploy App SDK ===
+* [https://urldefense.proofpoint.com/v2/url?u=https-3A__www.youtube.com_watch-3Fv-3DcqDVxzYt9lY&d=DwMGaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=NSXeOzyqbRdsXM127ZiphQ&m=e1aztAOhx1tyaakucfLf_fPfneoSqzwX6c1D_MpVwvY&s=7qseMh2xOcjEG5Dt7_X0P5TPG2whDIzJYIPuadhjqqc&e= Spleen Segmentation Overview]
+* [https://urldefense.proofpoint.com/v2/url?u=https-3A__www.youtube.com_watch-3Fv-3DnivgfD4pwWE&d=DwMGaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=NSXeOzyqbRdsXM127ZiphQ&m=e1aztAOhx1tyaakucfLf_fPfneoSqzwX6c1D_MpVwvY&s=na7ktiKAAgwcvRDQwVeucCNCq_19BGYoKytn3-SqvyM&e= Spleen Segmentation Deepdive]
+* [https://urldefense.proofpoint.com/v2/url?u=https-3A__www.youtube.com_watch-3Fv-3DWwjilJFHuU4&d=DwMGaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=NSXeOzyqbRdsXM127ZiphQ&m=e1aztAOhx1tyaakucfLf_fPfneoSqzwX6c1D_MpVwvY&s=k10xZSVemV69BMYtvaRmUtuITA8HhFOgF5-QILbLBxw&e= MedNIST Classification]
+=== MONAI Packages ===
+If you would like to install MONAI on your own platforms, here are some useful links:
+* [https://urldefense.proofpoint.com/v2/url?u=https-3A__docs.monai.io_en_latest_whatsnew-5F0-5F7.html&d=DwMGaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=NSXeOzyqbRdsXM127ZiphQ&m=e1aztAOhx1tyaakucfLf_fPfneoSqzwX6c1D_MpVwvY&s=m_sJqlsaQQW5dRdUmTcTY6ysyaaCaUPnVVliC6W9SsM&e= MONAI Core]
+* [https://urldefense.proofpoint.com/v2/url?u=https-3A__docs.monai.io_projects_label_en_0.2.0_whatsnew.html&d=DwMGaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=NSXeOzyqbRdsXM127ZiphQ&m=e1aztAOhx1tyaakucfLf_fPfneoSqzwX6c1D_MpVwvY&s=XH8yqUKN66lK7HGZnuY-gskf665Joyv04YiC5gh3M3k&e= MONAI Label]
+* [https://urldefense.proofpoint.com/v2/url?u=https-3A__docs.monai.io_projects_monai-2Ddeploy-2Dapp-2Dsdk_en_latest_release-5Fnotes_v0.1.0.html&d=DwMGaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=NSXeOzyqbRdsXM127ZiphQ&m=e1aztAOhx1tyaakucfLf_fPfneoSqzwX6c1D_MpVwvY&s=_pzytNZK2W9-eQosc_GnDfRp_DuD7R-yPMTCX9IRDEk&e= MONAI Deploy App SDK]
 <!--Configuration-->