Difference between revisions of "Microbeannotator"

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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
 
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
 +
* HPC_{{uc:{{#var:app}}}}_REF - reference database
 
<!--Configuration-->
 
<!--Configuration-->
 
{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Revision as of 20:36, 2 August 2022

Description

microbeannotator website  

Easy-to-use pipeline for the comprehensive metabolic annotation of microbial genomes.

Environment Modules

Run module spider microbeannotator to find out what environment modules are available for this application.

System Variables

  • HPC_MICROBEANNOTATOR_DIR - installation directory
  • HPC_MICROBEANNOTATOR_BIN - executable directory
  • HPC_MICROBEANNOTATOR_REF - reference database




Citation

If you publish research that uses microbeannotator you have to cite it as follows:

MicrobeAnnotator: a user-friendly, comprehensive functional annotation pipeline for microbial genomes