Difference between revisions of "MicrobeAnnotator"

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[[Category:Software]][[Category:Microbial Annotation]][[Category:Biology]]
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[[Category:Software]][[Category:Annotation]][[Category:Biology]]
 
{|<!--CONFIGURATION: REQUIRED-->
 
{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|microbeannotator}}
 
|{{#vardefine:app|microbeannotator}}

Revision as of 17:52, 15 August 2022

Description

microbeannotator website  

Easy-to-use pipeline for the comprehensive metabolic annotation of microbial genomes.

Environment Modules

Run module spider microbeannotator to find out what environment modules are available for this application.

System Variables

  • HPC_MICROBEANNOTATOR_DIR - installation directory
  • HPC_MICROBEANNOTATOR_BIN - executable directory
  • HPC_MICROBEANNOTATOR_REF - reference database




Citation

If you publish research that uses microbeannotator you have to cite it as follows:

MicrobeAnnotator: a user-friendly, comprehensive functional annotation pipeline for microbial genomes