Difference between revisions of "MicrobeAnnotator"
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | ||
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory | ||
| + | * HPC_{{uc:{{#var:app}}}}_REF - reference database | ||
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 20:36, 2 August 2022
Description
Easy-to-use pipeline for the comprehensive metabolic annotation of microbial genomes.
Environment Modules
Run module spider microbeannotator to find out what environment modules are available for this application.
System Variables
- HPC_MICROBEANNOTATOR_DIR - installation directory
- HPC_MICROBEANNOTATOR_BIN - executable directory
- HPC_MICROBEANNOTATOR_REF - reference database
Citation
If you publish research that uses microbeannotator you have to cite it as follows: