Difference between revisions of "MiRBShunter"

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(Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|mirbshunter}} |{{#vardefine:url|https://github.com/TrabucchiLab/miRBShunter}...")
 
m (Text replacement - "#uppercase" to "uc")
 
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
+
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
  
 
<!--Configuration-->
 
<!--Configuration-->

Latest revision as of 21:21, 6 December 2019

Description

mirbshunter website  

A pipeline to identify miRNA binding sites from Ago2-CLIP data by de novo motif finding.

Environment Modules

Run module spider mirbshunter to find out what environment modules are available for this application.

System Variables

  • HPC_MIRBSHUNTER_DIR - installation directory
  • HPC_MIRBSHUNTER_BIN - executable directory