Difference between revisions of "MetAMOS"
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
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{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 21:22, 6 December 2019
Description
metAMOS is an integrated assembly and analysis pipeline for metagenomic data. It is built around the Bambus2 metagenomic scaffolder and includes many current tools for assembly, gene finding, and taxonomic classification. For more details see the gitHub link below.
Required Modules
Serial
- metamos
System Variables
- HPC_METAMOS_DIR - installation directory
Validation
- Validated 4/5/2018
