Difference between revisions of "MetAMOS"

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==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
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{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Latest revision as of 21:22, 6 December 2019

Description

metamos website  

metAMOS is an integrated assembly and analysis pipeline for metagenomic data. It is built around the Bambus2 metagenomic scaffolder and includes many current tools for assembly, gene finding, and taxonomic classification. For more details see the gitHub link below.

Required Modules

Serial

  • metamos

System Variables

  • HPC_METAMOS_DIR - installation directory





Validation

  • Validated 4/5/2018