Difference between revisions of "Meme"

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==Introduction==
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==Overview==
 
From the [http://meme.sdsc.edu/meme/intro.html Meme Website]:
 
From the [http://meme.sdsc.edu/meme/intro.html Meme Website]:
  
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# Discover motifs (highly conserved regions) in groups of related DNA or protein sequences using MEME and,
 
# Discover motifs (highly conserved regions) in groups of related DNA or protein sequences using MEME and,
 
# Search sequence databases using motifs using MAST.
 
# Search sequence databases using motifs using MAST.
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==Location==
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/apps/meme/4.3.0
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==Environment==
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MPI: mvapich_intel-0.9.9

Revision as of 21:52, 10 March 2010

Overview

From the Meme Website:

The MEME/MAST system allows you to:

  1. Discover motifs (highly conserved regions) in groups of related DNA or protein sequences using MEME and,
  2. Search sequence databases using motifs using MAST.

Location

/apps/meme/4.3.0

Environment

MPI: mvapich_intel-0.9.9