Difference between revisions of "MOOSE Configuration"

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{|align=right
 +
  |__TOC__
 +
  |}
 
== Configure and test your own "MOOSE" framework ==
 
== Configure and test your own "MOOSE" framework ==
 +
;Note: Make sure your .bashrc and .bash_profile shell initialization scripts are 'clean'. If you encounter errors while setting up MOOSE make sure there are no environment changes caused by those scripts.
 +
 
===Basic Steps===
 
===Basic Steps===
−
# mkdir projects
+
# mkdir projects (from a development session [[Development and Testing]])
 
# cd projects
 
# cd projects
−
# module load moose/12-aug-20
+
# module load moose/26-jul-21
 
# git clone https://github.com/idaholab/moose.git
 
# git clone https://github.com/idaholab/moose.git
 
# cd moose
 
# cd moose
 
# git checkout master
 
# git checkout master
 
# export VTKLIB_DIR=${HPC_VTK_LIB} VTKINCLUDE_DIR=${HPC_VTK_INC}
 
# export VTKLIB_DIR=${HPC_VTK_LIB} VTKINCLUDE_DIR=${HPC_VTK_INC}
−
# Run "./scripts/update_and_rebuild_libmesh.sh --enable-vtk-required"
+
# Run "./scripts/update_and_rebuild_libmesh.sh --enable-vtk-required --with-vtk-lib=${HPC_VTK_LIB} --with-vtk-include=${HPC_VTK_INC}" and allow it to complete.  It should finish without errors.
−
# Interrupt (''ctrl-c'') the above configure/build just after the ''git clone'' of libmesh is completed.
+
# cd test; make -j 4; ./run_tests -j 4 (from a login node)
−
# Patch the "configure" script using the accompanying patch file (see below).
 
−
# Rerun "./scripts/update_and_rebuild_libmesh.sh --enable-vtk-required" and allow it to complete.  It should finish without errors.
 
−
# cd test; run_tests -j 4
 
 
# Build and test the "phase field" module:
 
# Build and test the "phase field" module:
 
## cd moose/modules/phase_field
 
## cd moose/modules/phase_field
Line 21: Line 23:
 
## make -j 4
 
## make -j 4
 
##./run_tests -j 4
 
##./run_tests -j 4
−
=== Patch File (configure.patch) ===
+
 
−
<source lang=bash>
+
===Additional Information===
−
======================================configure.patch==========================================================
+
See [https://support.rc.ufl.edu/show_bug.cgi?id=43807 Bugzilla Request #43807]
−
--- a/configure 2020-08-07 07:56:18.955696774 -0400
+
 
−
+++ b/configure 2020-08-07 08:00:45.329361095 -0400
+
==Running MOOSE==
−
@@ -38452,24 +38452,26 @@
+
Now that Moose is configured, learn how to use it at [[Running MOOSE]]. Or from a development session ([[Development and Testing]]).
−
                  VTK_LIBRARY_WITH_VERSION="-L$VTK_LIB -lvtkIOCore-$vtkmajorminor -lvtkCommonCore-$vtkmajorminor -lvtkCommonDataModel-$vtkmajorminor \
 
−
                                            -lvtkFiltersCore-$vtkmajorminor -lvtkIOXML-$vtkmajorminor -lvtkImagingCore-$vtkmajorminor \
 
−
                                            -lvtkIOImage-$vtkmajorminor -lvtkImagingMath-$vtkmajorminor \
 
−
-                                          -lvtkParallelMPI-$vtkmajorminor -lvtkParallelCore-$vtkmajorminor"
 
−
+                                          -lvtkParallelMPI-$vtkmajorminor -lvtkParallelCore-$vtkmajorminor \
 
−
+                                          -lvtkCommonExecutionModel-$vtkmajorminor"
 
−
 
−
                                                                    VTK_LIBRARY_NO_VERSION="-L$VTK_LIB -lvtkIOCore -lvtkCommonCore -lvtkCommonDataModel \
 
−
                                          -lvtkFiltersCore -lvtkIOXML -lvtkImagingCore \
 
−
                                          -lvtkIOImage -lvtkImagingMath \
 
−
-                                        -lvtkParallelMPI -lvtkParallelCore"
 
−
+                                        -lvtkParallelMPI -lvtkParallelCore -lvtkCommonExecutionModel"
 
−
 
−
else
 
−
 
−
                                                    VTK_LIBRARY_WITH_VERSION="-L$VTK_LIB -lvtkIOCore-$vtkmajorminor -lvtkCommonCore-$vtkmajorminor -lvtkCommonDataModel-$vtkmajorminor \
 
−
                                            -lvtkFiltersCore-$vtkmajorminor -lvtkIOXML-$vtkmajorminor -lvtkImagingCore-$vtkmajorminor \
 
−
                                            -lvtkIOImage-$vtkmajorminor -lvtkImagingMath-$vtkmajorminor -lvtkIOParallelXML-$vtkmajorminor \
 
−
-                                          -lvtkParallelMPI-$vtkmajorminor -lvtkParallelCore-$vtkmajorminor"
 
−
+                                          -lvtkParallelMPI-$vtkmajorminor -lvtkParallelCore-$vtkmajorminor \
 
−
+                                          -lvtkCommonExecutionModel-$vtkmajorminor"
 
−
 
−
                                                                    VTK_LIBRARY_NO_VERSION="-L$VTK_LIB -lvtkIOCore -lvtkCommonCore -lvtkCommonDataModel \
 
−
                                          -lvtkFiltersCore -lvtkIOXML -lvtkImagingCore \
 
−
                                          -lvtkIOImage -lvtkImagingMath -lvtkIOParallelXML \
 
−
-                                        -lvtkParallelMPI -lvtkParallelCore"
 
−
+                                        -lvtkParallelMPI -lvtkParallelCore -lvtkCommonExecutionModel"
 
−
 
−
fi
 
−
======================================================================================================
 
−
</source>
 

Latest revision as of 15:20, 5 May 2023

Configure and test your own "MOOSE" framework

Note
Make sure your .bashrc and .bash_profile shell initialization scripts are 'clean'. If you encounter errors while setting up MOOSE make sure there are no environment changes caused by those scripts.

Basic Steps

  1. mkdir projects (from a development session Development and Testing)
  2. cd projects
  3. module load moose/26-jul-21
  4. git clone https://github.com/idaholab/moose.git
  5. cd moose
  6. git checkout master
  7. export VTKLIB_DIR=${HPC_VTK_LIB} VTKINCLUDE_DIR=${HPC_VTK_INC}
  8. Run "./scripts/update_and_rebuild_libmesh.sh --enable-vtk-required --with-vtk-lib=${HPC_VTK_LIB} --with-vtk-include=${HPC_VTK_INC}" and allow it to complete. It should finish without errors.
  9. cd test; make -j 4; ./run_tests -j 4 (from a login node)
  10. Build and test the "phase field" module:
    1. cd moose/modules/phase_field
    2. make -j 4
    3. ./run_tests -j 4
  11. Build and test the "combined" module:
    1. cd moose/modules/combined
    2. make -j 4
    3. ./run_tests -j 4

Additional Information

See Bugzilla Request #43807

Running MOOSE

Now that Moose is configured, learn how to use it at Running MOOSE. Or from a development session (Development and Testing).

Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=MOOSE_Configuration&oldid=27887"