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mgert website  

MGERT is a computational pipeline for easy retrieving of MGE's coding sequences of a particular family from genome assemblies. MGERT utilizes several established bioinformatic tools combined into single pipeline which hides different technical quirks from an inexperienced user.

Environment Modules

Run module spider mgert to find out what environment modules are available for this application.

System Variables

  • HPC_MGERT_DIR - installation directory
  • HPC_MGERT_BIN - executable directory