Difference between revisions of "M5nr"
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(m5nr does not appear to exist on system. There is an m5tools directory in /apps though.) |
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[[Category:Software]][[Category:Bioinformatics]][[Category:Genomics]] | [[Category:Software]][[Category:Bioinformatics]][[Category:Genomics]] | ||
[[Category:AlexReview]] | [[Category:AlexReview]] | ||
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{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|m5nr}} | |{{#vardefine:app|m5nr}} | ||
Revision as of 21:10, 5 April 2018
Description
The M5NR is an integration of many sequence databases into one single, searchable database (plus an index). A single similarity search (using BLAST or BLAT) will allow the user to retrieve similarities to several databases (e.g. NCBI’s nr, KEGGs database or the EGGnogs — see below for a complete list).
Required Modules
Serial
- m5nr
System Variables
- HPC_{{#uppercase:m5nr}}_DIR - installation directory