Difference between revisions of "LMAP"
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Revision as of 14:14, 20 April 2018
Description
A package of user-friendly terminal/command-line and interactive applications developed in Perl, to enable the high-throughput analyses of multiple genes/datasets in PAML (codeml). LMAP was designed for the workstation multi-core environment and enables all the codeml codon substitutions models: site models, branch models, branch-site models and clade models.
Environment Modules
Run module spider lmap to find out what environment modules are available for this application.
System Variables
- HPC_{{#uppercase:lmap}}_DIR - installation directory
- HPC_{{#uppercase:lmap}}_BIN - executable directory
- HPC_{{#uppercase:lmap}}_DOC - documentation directory
- HPC_{{#uppercase:lmap}}_EXE - example directory
Citation
If you publish research that uses lmap you have to cite it as follows: