Installed Software

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The following is a list of the installed software packages maintained at the UF HPC Center

Software

Software Version Home Website
hypre 2.0.0 Lawrence Livermore National Labs
GULP 3.0.1 www.ivec.org
Gromacs 3.3.1 www.gromacs.org
Amber 9 amber.scripps.edu
gaussian 03 www.gaussian.com
Abaqus 6.6-1 www.abaqus.com
Adina 8.3 www.adina.com
Ansys 10.0 www.ansys.com
mpiBlast 1.3.0 NCBI
ccp4 6.0.2 www.ccp4.ac.uk
Crystal 1.0.2  
Ensight 8.2 www.ensight.com
cnssolve 1.1 cns.csb.yale.edu
dlpoly 3.0.2 www.cse.clrc.ac.uk
dock 6.0 dock.compbio.ucsf.edu
Eman 1.8 blake.bcm.tms.edu
PWscf 3.0 www.pwscf.org
Fragstats 2.0 www.umass.edu
FSL 3.3 www.fmrib.ox.ac.uk
Geant 4.8.2 geant4.web.cern.ch
meme 3.0.13 meme.sdsc.edu
metis 4.0 glaros.dtc.umn.edu
NAMD 2.6 www.ks.uiuc.edu
R 2.2.1 www.r-project.org
Rosetta 2.1.1 www.rosettacommons.org
Siesta 2.0 www.uam.es
VASP 4.6.28 cms.mpi.univie.ac.at
Matlab 7.4.0.287 www.mathworks.com
Blender 2.44 www.blender.org
AUTO3DEM 2.03 cryoem.ucsd.edu

Libraries

Library Version Compiler Location
FFTW 2.1.5 Intel /opt/intel/fftw/2.1.5/lib