Difference between revisions of "Ibdne"

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==System Variables==
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
{{#if: {{#var: conf}}|==Configuration==
{{#if: {{#var: conf}}|==Configuration==

Revision as of 19:37, 23 February 2018


ibdne website  

The IBDNe program estimates the historical effective population size of a homogenous population. The input for the IBDNe program is the set of identity-by-descent (IBD) segments detected by the IBDseq program.

Environment Modules

Run module spider ibdne to find out what environment modules are available for this application.

System Variables

  • HPC_{{#uppercase:ibdne}}_DIR - installation directory
  • HPC_{{#uppercase:ibdne}}_BIN - executable directory


If you publish research that uses ibdne you have to cite it as follows:

S R Browning and B L Browning (2015). Accurate non-parametric estimation of recent effective population size from segments of identity by descent. American Journal of Human Genetics 97(3):404-418. doi:10.1016/j.ajhg.2015.07.012