Hecaton is a framework specifically designed for plant genomes that detects copy number variants (CNVs) using short paired-end Illumina reads. CNVs are called by integrating existing structural variant callers through a machine-learning model and several custom post-processing scripts.
module spider hecaton to find out what environment modules are available for this application.
- HPC_HECATON_DIR - installation directory
- HPC_HECATON_BIN - executable directory