Haphpipe
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Description
HAplotype and PHylodynamics pipeline for viral assembly, population genetics, and phylodynamics.
Environment Modules
Run module spider haphpipe to find out what environment modules are available for this application.
System Variables
- HPC_HAPHPIPE_DIR - installation directory
- HPC_HAPHPIPE_BIN - executable directory
Citation
If you publish research that uses haphpipe you have to cite it as follows:
When using HAPHPIPE, please cite their article when it is available. For now, reference the GitHub website: https://github.com/gwcbi/haphpipe and the validation paper.