Genrich
Revision as of 18:53, 16 May 2019 by Maxprok (talk | contribs) (Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|genrich}} |{{#vardefine:url|https://github.com/jsh58/Genrich}} <!--CONFIGURA...")
Description
Genrich is a peak-caller for genomic enrichment assays (e.g. ChIP-seq, ATAC-seq). It analyzes alignment files generated following the assay and produces a file detailing peaks of significant enrichment.
Environment Modules
Run module spider genrich to find out what environment modules are available for this application.
System Variables
- HPC_{{#uppercase:genrich}}_DIR - installation directory
- HPC_{{#uppercase:genrich}}_BIN - executable directory