Difference between revisions of "GenotypeHarmonizer"
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Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
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| − | [[Category:Software]][[Category:Biology | + | [[Category:Software]][[Category:Biology]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|GenotypeHarmonizer}} | |{{#vardefine:app|GenotypeHarmonizer}} | ||
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| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
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==System Variables== | ==System Variables== | ||
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | ||
Latest revision as of 19:01, 12 August 2022
Description
The Genotype Harmonizer is an easy to use command-line tool that allows harmonization of genotype data stored using different file formats with different and potentially unknown strands.
Environment Modules
Run module spider GenotypeHarmonizer to find out what environment modules are available for this application.
System Variables
- HPC_GENOTYPEHARMONIZER_DIR - installation directory
- HPC_GENOTYPEHARMONIZER_BIN - executable directory
- HPC_GENOTYPEHARMONIZER_DOC - documentation directory
- HPC_GENOTYPEHARMONIZER_EXE - example directory
Citation
If you publish research that uses GenotypeHarmonizer you have to cite it as follows:
https://bmcresnotes.biomedcentral.com/articles/10.1186/1756-0500-7-901