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genomic-fluidity website  

A collection of Perl scripts to calculate gene-level similarity among annotated genomes as used in Kislyuk et al. BMC Genomics 12: 32 (2011). The scripts can be executed from the command line and the only dependencies are BioPerl and NCBI BLAST.

Environment Modules

Run module spider genomic-fluidity to find out what environment modules are available for this application.

System Variables

  • HPC_GENOMIC-FLUIDITY_DIR - installation directory
  • HPC_GENOMIC-FLUIDITY_BIN - executable directory
  • HPC_GENOMIC-FLUIDITY_DOC - documentation directory